|
Name : lysX (CDB402_2001) Accession : YP_005128499.1 Strain : Corynebacterium diphtheriae INCA 402 Genome accession: NC_016783 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase 2 Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 2169808 - 2172957 bp Length : 3150 bp Strand : + Note : - DNA sequence : ATGCATAAACGTTGGGAATCTCGCCTCTTATTATGGACGGCACAGGTATCCACCATCTGGATGGTGGTGGGCCTTGTGCT CAAGTACATCAATTGGGATCTCACCGAGTCGATCGCGACGGCGTTCTCGGTATTTAACCTGCCGAGTTATCCCTCGTTGT TCATTGCCATCTTGATGGTGCTGCTGACCTCCGGCTTATTGCGTGGTAACCGTGGCGCGCTGGTGTTTTATCTCCTTGGT TTCCAGGTGCCCTCGCTACTGATTGGCATTGCGTACCTGCTCATCGTTGTTTTTGATGCCGAAGAAACACTAGATGTCTT TTCGCTTCTGGTACTTATCTCCACTGCAGCTTCGGTGCTGTTCTTGGTGGCAGGTTGGCGTGCCCGCGACGAGTTCCCCG CCCGTGTCGAGGGCTCGTGGGTAAAGGCACTGGTGGTGTTGGGGGGCGGCATTGCGGTGTCGTTTAGCATCGTCTTGTCG CTTTTGGTGGTCTACTACCACAAGCCGATTGATTTGTCGGCAGTGTGGGCAATGTATACCGCTCTTGGTGTGAGTCCGAA CCAACCGCCGTTTGCTGCGGGTATTCATGCCCCGCACTATCTCAAGGTGCTGGGTTCTGTGTTGTCCTCGGCTGCTATTT TTCTTGCGTTGGCTGTGATGATGCGTTCGCGTAAGTTCTATCGCGCCAGCGCCGAGGATCACCTGTTGTTGCGTAAGTTG TTGTTGTCACCGCCGTCCTCGGATTCGTTGGCGTATTTTGCCACGCGTGATGATCGCAATCTTGTGGTGTCACCTAATGG TGCTGCTGCGATTTCTTATCGTGTGATTGATGGGGTGTGTTTGGCTGCGGGCGATCCGATTGGTGATCCAGCTTGCTGGC CTGCTGCGATGTCCGCGTGGCGTACCGAGGCAAGGAAGAATGGCTGGATTCTCGGTGTTGCTTCGGCCTCGGAGAAGGGT GCGCGTGCCTACGCTGAGATGGGTCTGCGAGTTATTCCCCTAGGCGATGAGGCGATCATTGACACCGAGCATTTCCGGTT GAAGGATCTTCCAGCGGTTCGTAAAGAACTCGCTGGTCCACGCAAGGCTGGCTATACCGTCAAGGTGGTGCGCCAAGAGC AGCTCACGGCCGAGGAAGCCGCCCATTATGCGGAGGTAGCGCAGCAGTGGCGGCGTGGCGACGAGCGTGGTTTCACCATG GCGTCGGGTCGCGTGGGTGATCCTCGTGATCGTCGCACGGTGCTGGTTGCAGCCCATGATTCCACCGGCGAGCCGATGGG CGTGCTCACGTTGGTGCCGTGGGGCCGTAATGGGCTTTCCTTGGATGTGATGCGTCGTAATCCGAAGGCGCTCGGTGGTG TGACTGAGCTGATGGTGGCTGCTCTGGCCGCCGAGGCCCCCAACCTTGGTGTTAGTCGTTTCTCCTTAAACTTTGTAACC TTCCGCGAGTCCCTCGACCGCGGCATGGCGGTCGGTGCGTCCCCATGGGAGCGGCTGCTATTTAAGCTGTTGGTCACCTC CTCGCGGTGGTGGCAGATCCAGTCGTTGTACCAGTCGAATGTGAAGTATGAGCCCTCGTGGCAGGCGCGTTATCTGTGCA TTGAGCATGGCTTCCACACCCCACGCGTTCTGATTGCGTTCGCTTCGGGTGAGGGCTTCTTGCCTGGTTTCAATCCATCG TTGGAGCCGCTGGGCGACCCTGAGGCTATTGCTGCAGTAGAGGCCGAAGCGCTGATGCCAAAGGTGATGCCGCCGCATCG TTCGGCGCAGCAAAAAGCACGGTTGTGCAAGCTCAATGCGTTGGAGCACAGTGGTATGCGCGCGTATCCGCCGGCTGTTC CGCGCGGCGAGAATTCTTTGACGGGCCGTATTTGGTTTATTCGCGACCACGGCAAGGTGCTGTTCGCCGATGTGGTAGAG GGGGAACGTCGTACCCAGTTGCTTATCGACGCCACCACTCCCGACGCACTAGCCTCCTTTAAACGCTTAGTGAGCCGTGG CGACATTATTTCTGCCACCGGTGTGATGGGACAGTCGCGCAATGGCACACCGTCGCTGCTTGTGCAGTCGTGGACGATGG CGGCAAAGTCTCTGGTTCCGATGCCTCGCCAGGCATCGCGTAACCCGCATACCCGCGCGAAGTTCCGCCACATTGATTTC ACTATGAATTCGCAGGCACGCTCGATTTTCTCAGCGCGTTCTCGTGCCATCACCGCGGTGCGCTCGGTGCTGGTGTCGCA AGGCTACCTTGAGGCAGAAACCCCTATTTTGCAGACGATCCACGGTGGCGCCAATGCCCGCCCCTTTAGGACTCACATCC GTGCTTATGATCAGCCCCTGACCTTGCGTATCGCCCCCGAGCTGTATCTCAAGCGTTTGGTCGTGGGCGGGTTTGAGCGA GTCTTTGAGATGGGCCGAAACTTCCGCAACGAGGGCGTGGATGCTACCCACAACCCAGAGTTCACCTCCTTGGAGGCCTA CCAGGCGTACGGCAACTGGGACACCATGCGGGAGCTAACAGAGAACATCATCCGTTCGGCAGCGATCGCGGTCCACGGTT CCCCGCAGGTAACCACTGCTTCTGGCGAGGTTCTTGACCTTTCAGGTTCGTGGCCAGTGGTTCCTGTGTATGAGGCGGTA TCGCGTGCGGTGGGTGAAACAATTTCACCTTCCGGATCCCTCGCAGACTACGCGCATATCGCCCAGCGTTACGAGATCGA AGCGGCCACCGTTGGCGACCTCGTCAACGAGCTTTACGACGAACTGGTCGAACCCACCACAGTATTCCCCACTTTCTACG CTGGTTTCCCCGTAGAAACATCCCCATTGACCATGGCCGACCCCGACGAACCACGCATTGCGCAACGCTGGGACCTGGTG GCCTGTGGCATGGAGCTCGGAACCGCCTACACCGAGCTTGCCGACCCCATCGAACAACGCGCGCGCCTCACCGACCAGTC ACTTCGTGCCGCTGGCGGTGATGCCGAAGCCATGGAACTCGACGAGAACTTCCTGCAGGCACTGGAATTTGGCATGCCGC CAACCGGTGGACTCGGAATTGGTATCGACCGCCTCGTCATGTTCCTCACCGGTCAAAACATCCGCGAGGTGCTGGCTTTC CCCTTTGTTAAACCAGACAGCACTAACTAA Protein sequence : MHKRWESRLLLWTAQVSTIWMVVGLVLKYINWDLTESIATAFSVFNLPSYPSLFIAILMVLLTSGLLRGNRGALVFYLLG FQVPSLLIGIAYLLIVVFDAEETLDVFSLLVLISTAASVLFLVAGWRARDEFPARVEGSWVKALVVLGGGIAVSFSIVLS LLVVYYHKPIDLSAVWAMYTALGVSPNQPPFAAGIHAPHYLKVLGSVLSSAAIFLALAVMMRSRKFYRASAEDHLLLRKL LLSPPSSDSLAYFATRDDRNLVVSPNGAAAISYRVIDGVCLAAGDPIGDPACWPAAMSAWRTEARKNGWILGVASASEKG ARAYAEMGLRVIPLGDEAIIDTEHFRLKDLPAVRKELAGPRKAGYTVKVVRQEQLTAEEAAHYAEVAQQWRRGDERGFTM ASGRVGDPRDRRTVLVAAHDSTGEPMGVLTLVPWGRNGLSLDVMRRNPKALGGVTELMVAALAAEAPNLGVSRFSLNFVT FRESLDRGMAVGASPWERLLFKLLVTSSRWWQIQSLYQSNVKYEPSWQARYLCIEHGFHTPRVLIAFASGEGFLPGFNPS LEPLGDPEAIAAVEAEALMPKVMPPHRSAQQKARLCKLNALEHSGMRAYPPAVPRGENSLTGRIWFIRDHGKVLFADVVE GERRTQLLIDATTPDALASFKRLVSRGDIISATGVMGQSRNGTPSLLVQSWTMAAKSLVPMPRQASRNPHTRAKFRHIDF TMNSQARSIFSARSRAITAVRSVLVSQGYLEAETPILQTIHGGANARPFRTHIRAYDQPLTLRIAPELYLKRLVVGGFER VFEMGRNFRNEGVDATHNPEFTSLEAYQAYGNWDTMRELTENIIRSAAIAVHGSPQVTTASGEVLDLSGSWPVVPVYEAV SRAVGETISPSGSLADYAHIAQRYEIEAATVGDLVNELYDELVEPTTVFPTFYAGFPVETSPLTMADPDEPRIAQRWDLV ACGMELGTAYTELADPIEQRARLTDQSLRAAGGDAEAMELDENFLQALEFGMPPTGGLGIGIDRLVMFLTGQNIREVLAF PFVKPDSTN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS1 | YP_005682181.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 66 |
| lysS1 | YP_005684273.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 66 |
| lysX | YP_003784331.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 66 |
| lysS1 | YP_005686365.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 66 |
