Gene Information

Name : irp1B (CDB402_1992)
Accession : YP_005128490.1
Strain : Corynebacterium diphtheriae INCA 402
Genome accession: NC_016783
Putative virulence/resistance : Virulence
Product : ABC-type Fe3+-siderophore transport system, permease component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2158825 - 2159745 bp
Length : 921 bp
Strand : -
Note : -

DNA sequence : 
ATGTTCGGCGTTCGCAGCATTACACCGGCCGAAGCTCTATCGGCGCTCGGCGGTGCTACCGACACCGCCGGTGAAGCTGC
AGCGTGGACTCGTATTCCACGCACGCTACTGGCGCTCTGCGCGGGTGCGGCACTCGCTACCTCAGGCACTGCTTTCCAGG
CTGTGACACGAAATCCACTGGCAGACCCTGGAATCTTCGGTGTTCTTGCGGGCGCGTCTCTCGCAGTGGTCATCAGCCTT
ACGTTCTTTAACGTCAGTCGCACGCTTCCGACCATGCTTATTGCGTCGGCGGGCGCTTTCGCTGCTGCGGTGTTTGTCTA
CAGCGTTGGCTCGATTGGTCGCGGCGGCGCCACACCGCTCAAGCTCGCGCTTTCCGGTGCTGCCACGGCTGCCGCTTTGT
CCAGCTTGACCAGCGCCATCCTGTTGCCCCGCGCCAATGTCATGGACGAGTTCCGCAATTGGCAGATTGGTTCTGTCAGT
GGTGCGCAGTGGGAATCGCTCGCGGTGGCGCTGCCGCTGCTTGGGCTCGGCTTCGCCATAGTGTTTCTCACCAGCAGTGG
CCTTAACGCCCTGTCCCTCGGCGATGATGTCGCCACCAGCTTGGGCATTAACCTCACTCGCACGCGGATCTTGGTCACGC
TCGGCGCAGTCTTGCTTTGCGGAACCGCCACGGCCGTCACCGGCCCGATTGCCTTCGTCGGGCTAATCGTCCCGCACGTC
CTGCGCCTACTGCTCGGCACGGACCACCGCATCCTAATCCCAGCAAGTGCGCTGGCAGGCGCCGTATTACTGACACTCGC
AGACATCGCAGGACGCCTCCTTGGAGGCTCCTCCGAGATCGCCGTCGGCATTATCATGCCGTTCCTCGGCGCGCCACTGT
TCATCTGGATTGTGCGACAGACAAGGATGCGCGAACTATGA

Protein sequence : 
MFGVRSITPAEALSALGGATDTAGEAAAWTRIPRTLLALCAGAALATSGTAFQAVTRNPLADPGIFGVLAGASLAVVISL
TFFNVSRTLPTMLIASAGAFAAAVFVYSVGSIGRGGATPLKLALSGAATAAALSSLTSAILLPRANVMDEFRNWQIGSVS
GAQWESLAVALPLLGLGFAIVFLTSSGLNALSLGDDVATSLGINLTRTRILVTLGAVLLCGTATAVTGPIAFVGLIVPHV
LRLLLGTDHRILIPASALAGAVLLTLADIAGRLLGGSSEIAVGIIMPFLGAPLFIWIVRQTRMREL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 1e-35 48
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 1e-35 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
irp1B YP_005128490.1 ABC-type Fe3+-siderophore transport system, permease component VFG0926 Protein 2e-23 46