Gene Information

Name : srtC (CDB402_0156)
Accession : YP_005126670.1
Strain : Corynebacterium diphtheriae INCA 402
Genome accession: NC_016783
Putative virulence/resistance : Unknown
Product : putative fimbrial associated sortase-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 160191 - 161129 bp
Length : 939 bp
Strand : +
Note : Sortase (surface protein transpeptidase)

DNA sequence :
GTGGATCACACCCTCAGCACTGACGTCGAACCGGAGAAGGAACCGCGCCGTGCTAACAGCGCCAAAACCAGCCCCGTGCT
GGCCGCAGTACTCGTGATCCTTGGGCTGCTCGTGATGCTGTACCCGGTGACGTCCACCCTGTGGAATAACCACCTAGCCA
CGAAGGCCGCGCAGGAATACGCAAAACTCGAAAAGAGTGCCCCACAAGAGGTGAAGAACACCCAGTGGGAGCGTGCCCAC
GAGTACAACGAGAACCGAACAACCGGCCCCATCTTTGACCCCTGGCTCGCCCGCTTCGACGAGAACAACTCGGACTACCA
GGAATACCTGGACCAACTCGACGCGAACGACGCGATGGCGCGCCTCATCTTCCCCAAGATCAAGGCAGACCTGCCGATTT
TCCACGGGACAGATAACGACACTTTGCAAAAAGGCTTGGGGCACCTCTTCGGCTCCGACCTGCCGGTCGGCGGTAAGGGC
ATACACTCGGTGATCACCGGCCACACGGGCCTGGCGAACTCGACCATGTTCGACCACCTCAACAAGGCGGAGAAGGGTGA
TGCCTTCTACGTCCAGGTTTCCGGTGAGAAGCTGAAGTATGTGGTCGACCAGATCAAGGTTGTGCTCCCCACCGAAACCG
AAGACCTCCGCCCGGAGCAGGGCAAGGACTACCTCACCCTGATCACCTGCACCCCCTACGGGATCAACACGCACCGCCTG
CTGGTGCGCGGCCACCAGGTCCCGCTGGACTCGGAAGATCACGAGGTTTTCGACAAGAACCACGGTGCCGGGTGGCAGTG
GTGGATGTACGCGCTCCTCGCGGCAGCAGCTGTCGTGCTGCTCCTGCTGCTGCGGTGGCTACTGAAGAACAAGCGGGATG
GCGAATCCCAAGAAACGACAGAGATGATGAATGACGAAGGGGCTGGAGCAGATGACTAG

Protein sequence :
MDHTLSTDVEPEKEPRRANSAKTSPVLAAVLVILGLLVMLYPVTSTLWNNHLATKAAQEYAKLEKSAPQEVKNTQWERAH
EYNENRTTGPIFDPWLARFDENNSDYQEYLDQLDANDAMARLIFPKIKADLPIFHGTDNDTLQKGLGHLFGSDLPVGGKG
IHSVITGHTGLANSTMFDHLNKAEKGDAFYVQVSGEKLKYVVDQIKVVLPTETEDLRPEQGKDYLTLITCTPYGINTHRL
LVRGHQVPLDSEDHEVFDKNHGAGWQWWMYALLAAAAVVLLLLLRWLLKNKRDGESQETTEMMNDEGAGADD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0236 NP_938627.1 fimbrial associated sortase-like protein Not tested Not named Protein 5e-124 98
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 3e-77 63
srtC YP_005137206.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 2e-66 58
srtC1 YP_005141811.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 3e-60 56
DIP2012 NP_940343.1 fimbrial associated sortase-like protein Not tested Not named Protein 7e-53 49
DIP0233 NP_938624.1 fimbrial associated sortase-like protein Not tested Not named Protein 6e-53 47
srtH YP_005139151.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 4e-37 44