Gene Information

Name : srtB (CDB402_0154)
Accession : YP_005126668.1
Strain : Corynebacterium diphtheriae INCA 402
Genome accession: NC_016783
Putative virulence/resistance : Unknown
Product : putative fimbrial associated sortase-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 157091 - 158080 bp
Length : 990 bp
Strand : -
Note : Sortase (surface protein transpeptidase)

DNA sequence :
ATGACAGATCAACCCCCAACGCCGAACACGACGGACGCGACCCCGCCCCGCCAAGACAAGAAACTGAACACCAACGCGAT
CATTGCCGTCGTCCTCATCCTCGCCGGCCTGGGCGTATTGCTATACCCGGTGCTCGCCACCCAGTGGAATAATTACCAGC
AGTCCCGCGCCGCCGAGGCCTACTCGCAGCTGGAAAAGAGCGTGCCCCCAGAGGTCCTCAATAAGACCTGGGAGGAGGCG
CAGCAATACAACACCAACCTCCGGGATATCAACCCCGGCGATGCGTGGACCAGCTCCGACGACGAGAGCTCCCCAGCGTA
TCAGCGCTACCTGAATTACCTCTCCGTCCTGAACGAGACCGAGGCCATGGGCCGCATTGTACTGCCCTCCATCAAGTCCG
ACCTGCCAATCTTCCACGGCACCTCCGACCGCGTTCTGACCCGCGGGGTCGGCCACCTTTACGGCACGGACCTGCCTGTT
GGCGCACCCGGCGAGCTCGGCGAGGATGGCACTATCCCACCCGCCCCACCAGAGGGCCGACTCTCCGCACTTTCTGCCCA
TACCGGCCTGCAGAACGCCACCCTGTGGGACAACCTCAACCAGATCAAGAAGGGCGACCCGGTCTACGTCGCCGCGGCGG
GCGAGAAGCTGAAGTACGAGGTCCGGGACATCGAGGTCGTCACCCCGGATAAGACCAGCCTGCTACACCGCACGCCGAAT
AAGGACCTGGTCACGCTCATCACCTGCACCCCCTATGGCATCAACACCCACCGGCTGATCATCACCGCCGAGCGCGTGCC
GATGGACCCGCAGGAAGAGTCCGTCTTCGACGGGCAGGGCACCACCTGGCAGTGGTGGATGTGGGCCATCCTCGCTGCCG
CGGCGATCATCGTGCTGCTGCTGATCCGCTGGTGGTGGAAGAACTTCCGCAAGCAGAAAGGCGAGGAGGGCCCCGCAACC
TCCGGCTCTGGGGACACCACGGAGAGTTAA

Protein sequence :
MTDQPPTPNTTDATPPRQDKKLNTNAIIAVVLILAGLGVLLYPVLATQWNNYQQSRAAEAYSQLEKSVPPEVLNKTWEEA
QQYNTNLRDINPGDAWTSSDDESSPAYQRYLNYLSVLNETEAMGRIVLPSIKSDLPIFHGTSDRVLTRGVGHLYGTDLPV
GAPGELGEDGTIPPAPPEGRLSALSAHTGLQNATLWDNLNQIKKGDPVYVAAAGEKLKYEVRDIEVVTPDKTSLLHRTPN
KDLVTLITCTPYGINTHRLIITAERVPMDPQEESVFDGQGTTWQWWMWAILAAAAIIVLLLIRWWWKNFRKQKGEEGPAT
SGSGDTTES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0233 NP_938624.1 fimbrial associated sortase-like protein Not tested Not named Protein 9e-111 94
srtC YP_005137206.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 5e-66 60
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 8e-53 50
srtC1 YP_005141811.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 1e-46 48
DIP0236 NP_938627.1 fimbrial associated sortase-like protein Not tested Not named Protein 4e-49 47
srtE YP_005139150.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 1e-45 46
srtI YP_005126714.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 2e-36 43
DIP2012 NP_940343.1 fimbrial associated sortase-like protein Not tested Not named Protein 2e-40 43