Gene Information

Name : xerD (CDB402_1096)
Accession : YP_005127601.1
Strain : Corynebacterium diphtheriae INCA 402
Genome accession: NC_016783
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1182548 - 1183483 bp
Length : 936 bp
Strand : +
Note : -

DNA sequence :
ATGGGCTCAATAAGTAATATTGCTCGTCAATGGCTAACTCACTTAGCAGTGGAAAAAGGAGTTAGCGATAACACATTGTC
TAATTATCGTCGTGATCTTGAACGGTATACACGGTGGCTGCAAGTACAGGGAATCACAGATATTGAGAATATCTCCGCAC
AAGATATTGAAAGATATGTTCAAGAGTTGCGTAAGGGGGATAGTGATACTGGAAAAAAACCTCTAGCTGCCTCATCTGCT
GCGCGAGCTTTGATTGTTGCTCGTGGTCTACATCGTTTTGCATTGTTAGAAAACTTAGTGGAGAACGATGTATCTGCTGA
TGTCTCTCCACCTGCAATGGGGCGTCACCTGCCTGATACCCTCTCAGTCGAGGAAGTGAATCGTCTAATAGAAGCTATAC
CCATAGATGATGCGGCTTCGCCAGAAAATCTTAGGGATTGCGCTCTACTGGAGTTCCTCTATGCTACTGGAGCCCGCATT
TCGGAAGCAGTAGGTCTAGTGGTGGACGACGTGGCTGCAATTGTCGAAAATGAAGGCATTGTCCGAATAACTGGAAAGGG
CAACAAACAGCGTATTGTGCCTGTTGGTGATCAGTGTTTGTCAGCGCTCGAGCGATATGTCGTGAGAGGCAGACCGGCAA
TGTCAAAAGGGAAATCGCACGCACTTTTCCTTAATAAACGTGGCGGACAATTATCTAGACAAAGCGCTTGGCAAATTCTC
AAAAACTCAGCTCAACGCGCAGGAATTGAAAAAGATATTTCTCCACATACTTTGCGCCATAGTTTTGCCACTCATCTTTT
AGAAGGTGGGGCTGATGTTCGAGTAGTACAAGAATTGTTAGGGCATTCGTCGGTCACAACTACACAGATATACACCCATG
TAACTGCCGATAATCTACGATTTGTCTGGTCTCGTTCACATCCGCGTGCTCACTAA

Protein sequence :
MGSISNIARQWLTHLAVEKGVSDNTLSNYRRDLERYTRWLQVQGITDIENISAQDIERYVQELRKGDSDTGKKPLAASSA
ARALIVARGLHRFALLENLVENDVSADVSPPAMGRHLPDTLSVEEVNRLIEAIPIDDAASPENLRDCALLEFLYATGARI
SEAVGLVVDDVAAIVENEGIVRITGKGNKQRIVPVGDQCLSALERYVVRGRPAMSKGKSHALFLNKRGGQLSRQSAWQIL
KNSAQRAGIEKDISPHTLRHSFATHLLEGGADVRVVQELLGHSSVTTTQIYTHVTADNLRFVWSRSHPRAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-37 44
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-37 44