|
Name : irp2K (CDB402_1076) Accession : YP_005127581.1 Strain : Corynebacterium diphtheriae INCA 402 Genome accession: NC_016783 Putative virulence/resistance : Unknown Product : lipid A export ATP-binding/permease protein msbA Function : - COG functional category : - COG ID : - EC number : 3.6.3.- Position : 1148059 - 1149825 bp Length : 1767 bp Strand : + Note : ABC-type multidrug transport system, ATPase and permease components DNA sequence : ATGACCGAACAAAAACCACCCATTACATTTAGGCAAATATCTCAACCTGCCCACCGGCAGATCACGGTGTCGCTGCTATT GGCGGTGCTGGCGGCGTTTTTGTCGCTGGTGCCGGTAATCGTGCTGGTTGAGCTGGTGCGCACCGTAATGCTGTCCTTCC AGGGAGAGCCGATAGATGCGTCAAAGCTGTGGCTGCTAGTCGCGGCGCTCATGGTGGCCACCGTCCTACATGGACAGGCA ACCGTGAAGAGCCTCCAGGTAAGCCACCAGGCCGACGGCCTTTTGGGCGAGCACTTACGCCAGCAGCAGATTACCAAGCT GGGTAGGCTCCCGCTGTCTTGGTTTACGCGGACACCTTCGGGGACTGTGAAAACCTACATCGAAGACGACGTCACCAAGA TCCACCAGCTCATCGCCCACGCGCCGCACGATTATTCGGCCGGTGTACTCGTACCGCTATTGAGCCTAGGATACATGTTC GTGGTGGACTGGCGGATAGGCCTGCTGGGCCTGGTACCACTGCTGTTGGCAGTGGCCACCATGCCGTTTATGATGCGCGA GTTTCAAGAAAAGGCGGAGAAATTTAAGTCCAGCCAGAAGCAGCTAGACGCCGCCGTCGTAGAGTTGGTGCGCGGCATCC CGGTTATCAAGGTGTTTGTTCCGGAAGGCTACGACGAGAGCATTTTCCTTAGTCGTTCCCGGAGTTTTGGTGGGTTCTAT CGCGAGTGGTTGCACGCCACCGTACACCCCACCGCTTTGATGAAGATCTTCACCTCCACCGGGTTTGGCCTGCTGGTGGT AGCCGCGGCCAGCCCGTGGCTCATCACGTCTGCGGGCGTACCAGTGGCCGATGTGCTGGCAGCGTTTTTGTTCATCAACA ACATCGCCGCGCCTCTGCTTATGCTTTCGCGCACTAACATCATGTTTTCGGAGGCGAAGGCTGCCGCGGCGGATCTCATC GAGTTCTTCAACATCCCGGTATTGCCGCCCGCTGCTGGCGGCAGGGAGCCTGCAAACGCCGGAATTGAGTTGAAAGATTT AAGCTTCTCCTACGTGCCGGACACCCCGGTGCTTTCCGGCATTAACCAAAAACTTACCGCCGGCAGCATCACTGCGGTGG TGGGACCTTCCGGCTCGGGGAAGTCCACGTTAGCCGCGCTCATCCCCCGGCTATTAGACCCCACGGAGGGGTCGGTGCGC ATTGGTGGCGTCCCTAGTACTGATCTCCGATCTGACCAGCTCTACCGTAGGGTAGGGTTCGTCTTCCAGGACCCTTACCT TATGCGGATGAGCGTGCGGGATAACATTCGCCTCGCTCACCCGGAGGCCACCGACGCAGACGTGGTTCGCGCCGCCCACG CCGCCCAGATTCATGAGCGCATTACCCATCTGCCGCGCGGCTACGACTCGGTGGTGGGAGAGGACGCGCAGCTTTCCGGT GGCGAGCAGCAGCGGCTGGCTATTGCCCGGTCCATCTTGCTCGACGCGCCGATCCTCGTGTTGGATGAGGCCACCGCTTT TGCGGATCCGGACTCCGAGGCCGCGATCCAGCGGGCCATTACCGAGCTGGTGGCCGGGCGCACGCTAGTAGTTATCGCAC ACCGGCTCCACACGATCACCGGCGCTGACCGGATCCTCATGCTGGAAAACGGTGAGGTCACCGAAGCAGGCACTCACGAA GAGTTAGTGGCGGCAGGCAAGGGCTACGCCACGATGTGGGCACGCTACCAAACCGCGCAGGCGGGCATCCAAGGGGAGGA AAAATAA Protein sequence : MTEQKPPITFRQISQPAHRQITVSLLLAVLAAFLSLVPVIVLVELVRTVMLSFQGEPIDASKLWLLVAALMVATVLHGQA TVKSLQVSHQADGLLGEHLRQQQITKLGRLPLSWFTRTPSGTVKTYIEDDVTKIHQLIAHAPHDYSAGVLVPLLSLGYMF VVDWRIGLLGLVPLLLAVATMPFMMREFQEKAEKFKSSQKQLDAAVVELVRGIPVIKVFVPEGYDESIFLSRSRSFGGFY REWLHATVHPTALMKIFTSTGFGLLVVAAASPWLITSAGVPVADVLAAFLFINNIAAPLLMLSRTNIMFSEAKAAAADLI EFFNIPVLPPAAGGREPANAGIELKDLSFSYVPDTPVLSGINQKLTAGSITAVVGPSGSGKSTLAALIPRLLDPTEGSVR IGGVPSTDLRSDQLYRRVGFVFQDPYLMRMSVRDNIRLAHPEATDADVVRAAHAAQIHERITHLPRGYDSVVGEDAQLSG GEQQRLAIARSILLDAPILVLDEATAFADPDSEAAIQRAITELVAGRTLVVIAHRLHTITGADRILMLENGEVTEAGTHE ELVAAGKGYATMWARYQTAQAGIQGEEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| irp2K | YP_005163491.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 0.0 | 99 |
| irp2K | YP_005134503.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 0.0 | 99 |
