Gene Information

Name : srtB (CD241_0188)
Accession : YP_005124457.1
Strain : Corynebacterium diphtheriae 241
Genome accession: NC_016782
Putative virulence/resistance : Unknown
Product : putative fimbrial associated sortase-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 165308 - 166297 bp
Length : 990 bp
Strand : -
Note : Sortase (surface protein transpeptidase)

DNA sequence :
ATGACAGATCAACTCTCAACACCGAACACGACGGACGCGACCCCGCCCCGCCAAGACAAGAAACTGAACACCAACGCGAT
CATTGCCGTCGTCCTCATCCTCGCCGGCCTGGGTGTACTGCTATACCCGGTGCTCGCCACCCAGTGGAATAACTACCAGC
AGTCCCGCGCCGCCGAGGCCTACTCGCAGCTGGAAAAGGGCGTGCCCCCAGAGGTCCTCAATAAGGCCTGGGAGGAGGCG
CAGCAATACAACACCAACCTCGGGGATATCGACCCCGGCGATGCGTGGACCAGCTCCGACGACGAGAGCTCCCCAGCGTA
TCAGCGCTACCTGAATTACCTCTCCGTCCTGAACGAGACCGAGGCCATGGGCCGCATTGTACTGCCCTCCATCAAGTCCG
ACCTGCCAATCTTCCACGGCACCTCCGACCGCGTCCTGGCCCGCGGGGTCGGCCACCTTTACGGCACGGACCTGCCTGTT
GGCGCACCCGGCGTGCTCGGCGAGGATGGCGTTATCCCGCCCGCCCCACCAGAGGGCCGACTCTCCGCGCTTTCTGCCCA
TACCGGCCTGCAGAACGCCACCCTGTGGGATAACCTCGTCCAGCTCGAGGAGGGCGACCCGGTCTACGTCGCCGCGGCGG
GCGAGAAGCTGAAGTACGAGGTCCGGGACATCGAGGTCGTCACCCCGGATAAGACCAGCCTGCTGCGCCGCACGCCGAAT
AAGGACCTAGTCACGCTCATCACCTGCACCCCCTATGGCATCAACACCCACCGGCTGATCATCACCGCCGAGCGCGTGCC
GATGGACCCACAGGAAGAGTCCGTCTTCGACGGGCAGGGCACCACCTGGCAGTGGTGGATGTGGGCCATCCTCGCTGCCG
CGGCGATCATCGTGCTGCTGCTGATCAGCTGGTGGTGGAAAAACTTCCGCAAGCAGAAGGGCGAAGAGGAACCTGCAACC
TCCGGCGCTGGGGACACCACGGAGAGTTAA

Protein sequence :
MTDQLSTPNTTDATPPRQDKKLNTNAIIAVVLILAGLGVLLYPVLATQWNNYQQSRAAEAYSQLEKGVPPEVLNKAWEEA
QQYNTNLGDIDPGDAWTSSDDESSPAYQRYLNYLSVLNETEAMGRIVLPSIKSDLPIFHGTSDRVLARGVGHLYGTDLPV
GAPGVLGEDGVIPPAPPEGRLSALSAHTGLQNATLWDNLVQLEEGDPVYVAAAGEKLKYEVRDIEVVTPDKTSLLRRTPN
KDLVTLITCTPYGINTHRLIITAERVPMDPQEESVFDGQGTTWQWWMWAILAAAAIIVLLLISWWWKNFRKQKGEEEPAT
SGAGDTTES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0233 NP_938624.1 fimbrial associated sortase-like protein Not tested Not named Protein 9e-117 94
srtC YP_005137206.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 3e-66 60
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 5e-53 50
srtC1 YP_005141811.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 1e-45 47
DIP0236 NP_938627.1 fimbrial associated sortase-like protein Not tested Not named Protein 5e-49 47
srtE YP_005139150.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 9e-44 45
srtI YP_005126714.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 9e-38 44
DIP2012 NP_940343.1 fimbrial associated sortase-like protein Not tested Not named Protein 1e-39 43