Gene Information

Name : spaA (CD241_1908)
Accession : YP_005126165.1
Strain : Corynebacterium diphtheriae 241
Genome accession: NC_016782
Putative virulence/resistance : Virulence
Product : putative surface-anchored fimbrial subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2023763 - 2025340 bp
Length : 1578 bp
Strand : -
Note : -

DNA sequence :
ATGACTGTACGGGGGTGTCGTCTGGCGACACTTGCAACGACTTTGACATTGTTTGTATCAAACGTCACACTTGCCTCAGT
GTTTGCTGAAGAGTCACAGTATCATGCAGTCCAACTAGGAGAGAGTCCTCTCAGCGTTGACGGCCTTAGTATTCCAGAAC
GTACGAGTATAGCCGTGCATGCATTGATGGGACTGCCTACGGGACAGCCGGCTAATGGTACAAAGCTCGATTCGATTGGC
CTGCCAAAAGTAGATGGCATGTCGTTTACGCTCTACAGGGTTAACGAGATTGATCTGACTACGCAAGCGGGTTGGGATGC
GGCGTCGAAAATCAAGCTGACTGATCTTTATATAGATGGCAAACCAACGAGCCGTGTGACCAAAGTCGCCACCAAGAAAA
CCGAAGGCGGCGTGGCCAAATTCGATAACCTCGAACCAGCCCTCTACCTCGTCGTTCAAGAGCTCAACGGCGCAGAGGCT
GTGGTGCGTTCGCAACCGTTCTTGGTGGCCGCGCCACAGACAAACCCGACTGGCGACGGCTGGCTCCAAGACGTGCACGT
GTACCCCAAGCACCAGGCTTTGTCTGAGCCGGTGAAAACTGCTGTGGACCCGGATGCCACGCAGCCAGGTTTCTCGGTGG
GGGAGAACGTGAAGTATCGCGTGGCTACCAAGATTCCAGAAATCGCCTCGAACACTAAGTTCGAGGGTTTCACCGTGGCG
GATAAACTCCCCGCTGAATTGGGCAAACCAGACACTAATAAAATAACGGTAACCCTTGGGGGAAAGCCGATTAATTCCAC
CGACCTCTTGGTCCAAACCTATCAAGTCGGTGACCGCACCGTACTCAGCGTGCAACTAGCCGGCGCAACACTCCAGTCCT
TGGACCAGCATAAAGATCAAGAACTAGTCGTCGAGTTTGAGGCACCTGTGACCAAGCAGCCAGAAAACGGCCAGCTAGAT
AACCAAGCATGGGTACTACCGAGTAACCCCACTGCTCAGTGGGATCCAGAAGAAAGCGGCGATGCTGCGTTGCGCGGTAT
GCCGTCGTCACGCGTGAGTTCCAAGTTCGGCCAGATCACGATTGAGAAATCCTTTGACGGCAACACCCCAGGTGCCGATC
GCACCGCGACGTTCCAGCTGCATCGTTGCGAGGCCGACGGCAGCCTAGTCAAGTCCGACCCACCGATCTCCCTTGATGGC
AAGCAGGAGTTTGTTACCGGCCAAGATGGTAAGGCCGTACTCAGCGGTATCCACTTGGGCACCTTGCAGCTCGAGTCCAA
TGTTATGAAATATACCGACGCGTGGGCCGGCAAGGGAACCGAATTCTGCCTGGTAGAAACAGCTACTGCCAGCGGATATG
AGCTGTTGCCTAAGCCAGTGATAGTAAAGCTGGAAGCCAACGAGTCTACCAACGTGTTGGTAGAACAAAAAGTAAAGATC
GACAACAAGAAAAAGAACGCCGGATTTGAACTGCCACTCACAGGTGGTTCGGGGCGCATCGCCATCACTATCGGCATCGT
TGGTTTGCTCGTCGCCCTTGCAAGCTATGTCCTATCGCGTAGGAAGGACAACCGCTAG

Protein sequence :
MTVRGCRLATLATTLTLFVSNVTLASVFAEESQYHAVQLGESPLSVDGLSIPERTSIAVHALMGLPTGQPANGTKLDSIG
LPKVDGMSFTLYRVNEIDLTTQAGWDAASKIKLTDLYIDGKPTSRVTKVATKKTEGGVAKFDNLEPALYLVVQELNGAEA
VVRSQPFLVAAPQTNPTGDGWLQDVHVYPKHQALSEPVKTAVDPDATQPGFSVGENVKYRVATKIPEIASNTKFEGFTVA
DKLPAELGKPDTNKITVTLGGKPINSTDLLVQTYQVGDRTVLSVQLAGATLQSLDQHKDQELVVEFEAPVTKQPENGQLD
NQAWVLPSNPTAQWDPEESGDAALRGMPSSRVSSKFGQITIEKSFDGNTPGADRTATFQLHRCEADGSLVKSDPPISLDG
KQEFVTGQDGKAVLSGIHLGTLQLESNVMKYTDAWAGKGTEFCLVETATASGYELLPKPVIVKLEANESTNVLVEQKVKI
DNKKKNAGFELPLTGGSGRIAITIGIVGLLVALASYVLSRRKDNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP2013 NP_940344.1 surface-anchored fimbrial subunit Not tested Not named Protein 0.0 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaA YP_005126165.1 putative surface-anchored fimbrial subunit VFG2201 Protein 0.0 98