Gene Information

Name : srtB (Cp3995_1923)
Accession : YP_005124021.1
Strain : Corynebacterium pseudotuberculosis 3/99-5
Genome accession: NC_016781
Putative virulence/resistance : Unknown
Product : sortase B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2048735 - 2049694 bp
Length : 960 bp
Strand : -
Note : -

DNA sequence :
ATGCTAGACCCTGTAACAAAGACTGAACGGCCTAAAGTCGTTCATCGTTTGAAACAGAAGCGAGTTGGGAAGAAAAATAA
CCATGCATTAGCTGCGCTACTCGTGATTATTGGATTAATTATCATGGTCTACCCAGTGGTTTCGACCCAATGGAATAATT
GGAAACAGCAACGTGCAGCAGCAGAGTATGCCAAGATCGATAATTCAACGCCGAAGGTAGTTCATGAAGAAGCCTGGGAC
GCTGCTCATAAATATAACGAGGAGCGTGCACAAGGACCGATTCTTGATCCATGGGTTAGCCGTTTTGTCCCAGATAACTA
CGCGTATCAAGAATACTTAAGCGTATTAAATACGCAGGATGCAATGGGTCGTATTGTCCTTCCGTCCATAAAAACGGACC
TACCTATCTATCACGGTTCGAGCGAGGATGTCTTACAAAAAGGAATTGGTCATCTTTTTGGATCCGATCTTCCAGTGGGC
GGACGCGGGAGTCACTCGGTGTTGACTGGACATACGGGAATACCGACAGCAACACTTTTTGACAATTTAAATCGTGTTAA
AGAAGGCGATGCTTTCTTTATTCACATCGCTGGACACAAAATTAAATACGAAGTCGATCAGATCAAGATAGTTCTTCCTA
ATGAGACAGAAGATCTAAAAGTTGAAGCCGGCAAAGATTTAATCACATTAGTTACCTGTACTCCCTACGGGATTAACACA
CATCGTTTATTAGTTCGTGGACATCAAGTTCCAATAGCCGAAGAAGAAAAAAGCATGCTCAACGAGGTACAGGGTGTCTC
TTGGCAATGGTGGATGTATGCACTTACCGCAATATTCATCGTAGGAGTCATTGGGCTTATCGCGTGGTTAATAAAACAAT
CACGTGTGTCTTCTAAGCGGCATAAAGACTCTCTGATTGTCCCTGACTCCGAATCTACCGAGAATAAAACTGAACTGTGA

Protein sequence :
MLDPVTKTERPKVVHRLKQKRVGKKNNHALAALLVIIGLIIMVYPVVSTQWNNWKQQRAAAEYAKIDNSTPKVVHEEAWD
AAHKYNEERAQGPILDPWVSRFVPDNYAYQEYLSVLNTQDAMGRIVLPSIKTDLPIYHGSSEDVLQKGIGHLFGSDLPVG
GRGSHSVLTGHTGIPTATLFDNLNRVKEGDAFFIHIAGHKIKYEVDQIKIVLPNETEDLKVEAGKDLITLVTCTPYGINT
HRLLVRGHQVPIAEEEKSMLNEVQGVSWQWWMYALTAIFIVGVIGLIAWLIKQSRVSSKRHKDSLIVPDSESTENKTEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 6e-99 71
DIP0236 NP_938627.1 fimbrial associated sortase-like protein Not tested Not named Protein 4e-78 60
srtC YP_005137206.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 7e-70 55
srtC1 YP_005141811.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 6e-62 49
DIP2012 NP_940343.1 fimbrial associated sortase-like protein Not tested Not named Protein 7e-52 46
DIP0233 NP_938624.1 fimbrial associated sortase-like protein Not tested Not named Protein 2e-52 46
srtI YP_005126714.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 1e-49 45
srtE YP_005139150.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 3e-51 42