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Name : clpC (Cp3995_1820) Accession : YP_005123920.1 Strain : Corynebacterium pseudotuberculosis 3/99-5 Genome accession: NC_016781 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 1941354 - 1944011 bp Length : 2658 bp Strand : - Note : - DNA sequence : ATGTTCGAGAGGTTTACTGATCGTGCACGTCGCGTGATCGTCCTGGCGCAGGAAGAAGCGCGCGGCCTTAACCACAATTA CATCGGCACTGAGCACATCCTGCTCGGACTTATCCATGAGGGTGAGGGCGTTGCTGCAAAGGCCCTCGAGTCCATGGGCA TCTCCTTGGAAGCGGTTCGCCAAGAAGTAGAAGAAATCATCGGGCATGGTTCCGAGCCTCCAGTTGGGCACATCCCTTTT ACCCCCCGTGCAAAGAAAGTCCTTGAACTTTCCTTACGTGAGGGACTACAGATGGGACATAAGTACATCGGTACTGAGTT CCTGCTGTTGGGCTTGATCCGAGAAGGCGAAGGCGTCGCGGCTCAGGTATTGGTAAAACTTGGTGCAGATCTACCGCGGG TGCGCCAGCAAGTTATTCAGCTGCTTTCGGGCTATGAGGGCAGGGAGAGCCCCGAGAACAATGAGTCTGGCGGAGAGGCT GTTGGTGCTGGTACCGGTGCAGCCCGTGCCGGCCGCGGATCCGGCGCTGGCGATCGTTCCAATTCTTTGGTCTTGGATCA ATTTGGTCGGAACCTCACTCAGGCTGCCAAGGACGGCAAGCTGGACCCGGTTATAGGCCGCGAGAAAGAAATCGAGCGCA TCATGCAGGTTCTTTCGCGCCGCACCAAAAACAATCCCGTTTTGATCGGTGAGCCCGGTGTGGGAAAGACCGCCGTGGTC GAGGGACTGGCGCTAGATATTGTCAACGGCAAGGTGCCCGAGACTCTGAAGGATAAGCAGCTGTATTCCTTAGACCTAGG CTCCTTGGTCGCGGGGTCTCGTTATCGCGGTGACTTTGAGGAACGCCTGAAGAAGGTCCTCAAAGAGATTAATCAGCGCG GCGACATCATTTTGTTTATCGACGAGATCCACACCCTGGTGGGCGCCGGTGCGGCTGAAGGCGCTATCGACGCTGCTAGC CTGCTTAAGCCAAAGCTTGCTCGCGGAGAGCTGCAGACCATCGGAGCGACGACTCTCGACGAGTACCGTAAGCACATTGA GAAGGACGCTGCCCTTGAGCGTCGTTTCCAGCCAGTCAACGTGCCGGAACCAAGCGTGGAAATGACCATTGAGATTCTCA AGGGCCTGCGCGACCGCTACGAGGCACACCACCGCGTGTCCATCACAGACGGTGCGCTCGCTGCCGCGGCACAGTTGTCA GATCGCTATATCAATGACCGCTTTTTGCCTGATAAAGCGGTTGACCTTATAGATGAAGCCGGAGCGCGTATGCGCATCCA GCGCATGACCGCCCCTGAGTCGATCCGCAAGGTCGATGACCGCATCGCGGAGGTACGTCGGGAAAAAGAAGCTGCTATTG ATGCGCAGGACTTTGAAAAAGCCGCTGGCTTGCGTGACACCGAGCGGAAGCTGAACGAGGAACGCGCGGAGAAAGAAAAG CAATGGCGTTCTGGCGATCTGGAAGAAATCGCTGAAGTCGGCGAGGAGCAGATCGCGGAGGTTCTGGGCAACTGGACCGG AATTCCAGTGTTTAAGCTGACGGAAGAAGAGTCTTCTCGTCTGCTGCGCATGGAGGATGAGCTGCACAAGCGCATTATTG GGCAGGAGGACGCAGTTAAGGCTGTATCCCGTGCTATCCGCCGTACGCGCGCCGGACTGAAAGATCCGCGCCGTCCTTCG GGCTCCTTCATCTTTGCTGGCCCATCCGGTGTGGGTAAGACCGAGCTCTCTAAAGCATTGGCTAATTTCCTCTTTGGTGA TGACGATGCGCTGATTCAGATCGATATGGGCGAGTTCCATGATCGTTTCACCGCCTCGCGCCTGTTCGGTGCGCCTCCCG GATACGTTGGTTATGAGGAAGGCGGCCAGCTTACAGAGAAGGTACGTCGCAAGCCTTTCAGCGTTGTGCTTTTCGACGAG ATCGAGAAGGCCCACAAGGAGATCTACAACACGCTGCTGCAGGTGCTTGAAGACGGACGGCTTACCGACGGCCAAGGGCG CGTGGTGGACTTCAAGAACACCGTTCTGATCTTCACATCAAACCTGGGTACGCAGGATATCTCCAAGGCCGTGGGCATGG GCTTTAGCTCAGTCGGCGAGCATGATGCGGATGGCCAGTACTCCCGAATGAAGCAGAAGGTTAATGATGAGCTGAAGAAG CACTTCCGCCCTGAATTCCTTAACCGCATCGATGAGGTCGTGGTCTTCCGTCAGCTAACTCAAGACCAGATCGTCCAGAT GGTGGACCTATTGGTTAGCCGCGTGGCAAAGGCCTTGGCTCAGAAAGACATGGGTATCGAGCTCACCGAGAAGGCAAAGA GCCTCTTGGCACGTAGAGGATTCGATCCGGTACTGGGCGCGCGTCCATTGCGTCGCACGATTCAGCGTGAGATCGAGGAT GCGCTCTCTGAAAAGATTCTCTTTGGAGAGGTCGGCGCCGGCGAGATTGTCACGGTAGATGTTGAAGGCTGGGATGGAGA ATCCAAGGATACGGACAAAGCTGTTTTCACATTCGTGCCGCGTCCTAAGCCACTGCCGGATTTTGCTACGGAATCTCCTG AGGTAGTGGAGGCTCAGCAAGCTGTGGTCGACGCTGCAGATGACCCAGAGATGGTTCCTGAAGCTGATTTTGACGTAGAG GAAGCCAAGGAATCCTAA Protein sequence : MFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGHGSEPPVGHIPF TPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLVKLGADLPRVRQQVIQLLSGYEGRESPENNESGGEA VGAGTGAARAGRGSGAGDRSNSLVLDQFGRNLTQAAKDGKLDPVIGREKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVV EGLALDIVNGKVPETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAAS LLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVNVPEPSVEMTIEILKGLRDRYEAHHRVSITDGALAAAAQLS DRYINDRFLPDKAVDLIDEAGARMRIQRMTAPESIRKVDDRIAEVRREKEAAIDAQDFEKAAGLRDTERKLNEERAEKEK QWRSGDLEEIAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLRMEDELHKRIIGQEDAVKAVSRAIRRTRAGLKDPRRPS GSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDE IEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNLGTQDISKAVGMGFSSVGEHDADGQYSRMKQKVNDELKK HFRPEFLNRIDEVVVFRQLTQDQIVQMVDLLVSRVAKALAQKDMGIELTEKAKSLLARRGFDPVLGARPLRRTIQREIED ALSEKILFGEVGAGEIVTVDVEGWDGESKDTDKAVFTFVPRPKPLPDFATESPEVVEAQQAVVDAADDPEMVPEADFDVE EAKES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 94 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 5e-98 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_005123920.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 0.0 | 58 |
| clpC | YP_005123920.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 7e-152 | 52 |
