Gene Information

Name : tpx (BF638R_2786)
Accession : YP_005111818.1
Strain : Bacteroides fragilis 638R
Genome accession: NC_016776
Putative virulence/resistance : Virulence
Product : putative thiol peroxidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3274032 - 3274532 bp
Length : 501 bp
Strand : -
Note : -

DNA sequence : 
ATGGCAACAACAAATTTCAAAGGACAACCGGTAAAGCTGATTGGCGAATTTATACAGGTTGGAAAGGTGGCTCCCGATTT
CGAGCTGGTGAAAAGTGATTTATCTTCTTTCGCACTAAAAGATCTGAAAGGTAAGAATATTGTTCTGAATATTTTCCCGA
GTCTGGATACCGGTGTGTGCGCCACTTCGGTGCGTAAATTCAATAAAATGGCAGCCGGAATGAAGGATACCGTGGTATTG
GCCATTTCGAAAGACTTGCCGTTTGCGCAGGGACGCTTCTGCACGACAGAGGGTATCGAAAACGTGATTCCGTTGTCGGA
TTTCCGCTTTTCGGACTTCGACGAGAGCTATGGCGTGAGGATGGCTGACGGACCGCTGGCCGGACTGCTGGCGCGTGCGG
TAGTGGTGATTGGGAAAGACGGGAAAGTAGCTTATACAGAGCTTGTGCCGGAGATTACTCAGGAGCCGGATTATGAAAAG
GCATTGGCTGCTGTGAAATAA

Protein sequence : 
MATTNFKGQPVKLIGEFIQVGKVAPDFELVKSDLSSFALKDLKGKNIVLNIFPSLDTGVCATSVRKFNKMAAGMKDTVVL
AISKDLPFAQGRFCTTEGIENVIPLSDFRFSDFDESYGVRMADGPLAGLLARAVVVIGKDGKVAYTELVPEITQEPDYEK
ALAAVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 3e-31 45
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 2e-31 45
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 2e-31 45
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 1e-31 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_005111818.1 putative thiol peroxidase VFG0087 Protein 5e-32 45