Gene Information

Name : BCN_3121 (BCN_3121)
Accession : YP_005105654.1
Strain : Bacillus cereus NC7401
Genome accession: NC_016771
Putative virulence/resistance : Virulence
Product : thiol-activated cytolysin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3053301 - 3054821 bp
Length : 1521 bp
Strand : -
Note : similar to gpu:AE017274_234 [Bacillus cereus ATCC 10987], percent identity 97 in 505 aa, BLASTP E(): 0.0

DNA sequence :
ATGAAAAATTTTAAGGGAAGAAAGTTCCTTACATGTGTATTAGTTAGTCTATGCACTCTTAATTATTCATCTATTTCTTT
CGCAGAAACACAAGCCGGTCATGCAAATGATATAACTAAAAATGCTAGTAGCATTGATACTGGTATAGGGAATCTTACAT
ATAATAATCAAGAGGTTTTAGCTGTAAATGGTGATAAAGTAGAGAGTTTTGTTCCGAAAGAAAGTATCAATTCAAATGGT
AAATTTGTAGTAGTGGAACGTGAGAAAAAATCACTTACAACGTCACCAGTCGATATTTCGATTATTGATTCTGTAGCGAA
TCGTACGTATCCAGGAGCTGTACAACTTGCCAATAAAGCTTTTGCAGACAATCAACCGAGTTTATTAGTGGCTAAGAGAA
AGCCTTTGAATATTAGTATAGACTTACCTGGTATGAGAAAAGAAAATACAATCACTGTCCAAAATCCGACATATGGTAAT
GTGGCTGGAGCAGTAGATGATTTAGTATCTACTTGGAATGAAAAGTATTCCACAACACATACGTTACCTGCAAGAATGCA
GTATACAGAATCTATGGTGTATAGTAAAGCACAAATCGCAAGTGCTCTTAATGTTAATGCTAAATATCTTGATAACAGTC
TAAATATTGACTTTAATGCAGTTGCAAATGGAGAAAAGAAAGTGATGGTGGCCGCATATAAACAAATATTTTATACTGTA
AGTGCTGAACTACCTAACAATCCATCTGATCTCTTTGATAATAGTGTTACTTTTGGTGAGTTAACTCGTAAAGGAGTAAG
CAATTCGGCTCCACCTGTTATGGTTTCAAATGTAGCTTATGGTAGAACGGTTTATGTAAAATTAGAAACAACATCTAAGA
GTAAAGATGTACAAGCTGCTTTTAAAGCTTTACTTAAGAATAACAGCGTTGAAACGAGTGGGCAGTACAAAGATATTTTT
GAAGAAAGTACCTTTACTGCTGTCGTATTAGGTGGAGATGCGAAAGAGCATAACAAGGTTGTTACAAAAGATTTCAATGA
AATCCGAAATATCATTAAAGATAATGCTGAATTAAGTTTTAAAAATCCAGCATATCCAATTTCATATACAAGCACGTTCT
TAAAAGATAATGCAACTGCTGCTGTTCATAACAATACAGATTATATCGAGACGACAACTACAGAATATTCAAGTGCTAAA
ATGACACTTGATCATTACGGTGCTTATGTTGCTCAATTTGATGTATCTTGGGATGAATTCACATTTGATCAAAATGGGAA
AGAAATACTAACACATAAAACATGGGAAGGTAGTGGCAAAGACAAAACAGCTCATTATTCTACAGTAATCCCTCTTCCAC
CAAATTCAAAAAATATAAAAATCGTAGCAAGAGAATGTACAGGTCTTGCATGGGAATGGTGGAGAACAATTATTAATGAA
CAAAATGTTCCATTAACAAATGAAATAAAGGTTTCAATTGGAGGAACAACATTATACCCAACGGCTAATATTAGTCATTA
G

Protein sequence :
MKNFKGRKFLTCVLVSLCTLNYSSISFAETQAGHANDITKNASSIDTGIGNLTYNNQEVLAVNGDKVESFVPKESINSNG
KFVVVEREKKSLTTSPVDISIIDSVANRTYPGAVQLANKAFADNQPSLLVAKRKPLNISIDLPGMRKENTITVQNPTYGN
VAGAVDDLVSTWNEKYSTTHTLPARMQYTESMVYSKAQIASALNVNAKYLDNSLNIDFNAVANGEKKVMVAAYKQIFYTV
SAELPNNPSDLFDNSVTFGELTRKGVSNSAPPVMVSNVAYGRTVYVKLETTSKSKDVQAAFKALLKNNSVETSGQYKDIF
EESTFTAVVLGGDAKEHNKVVTKDFNEIRNIIKDNAELSFKNPAYPISYTSTFLKDNATAAVHNNTDYIETTTTEYSSAK
MTLDHYGAYVAQFDVSWDEFTFDQNGKEILTHKTWEGSGKDKTAHYSTVIPLPPNSKNIKIVARECTGLAWEWWRTIINE
QNVPLTNEIKVSIGGTTLYPTANISH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
slo YP_281505.1 streptolysin O Virulence Not named Protein 3e-150 63
hly AAA69525.1 listeriolysin O Virulence LIPI-1 Protein 7e-101 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BCN_3121 YP_005105654.1 thiol-activated cytolysin VFG2275 Protein 3e-176 70
BCN_3121 YP_005105654.1 thiol-activated cytolysin VFG0976 Protein 9e-151 63
BCN_3121 YP_005105654.1 thiol-activated cytolysin VFG0074 Protein 9e-101 43
BCN_3121 YP_005105654.1 thiol-activated cytolysin VFG1363 Protein 9e-102 42