Gene Information

Name : Marpi_1818 (Marpi_1818)
Accession : YP_005097497.1
Strain : Marinitoga piezophila KA3
Genome accession: NC_016751
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1892605 - 1894104 bp
Length : 1500 bp
Strand : +
Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial

DNA sequence :
TTGAGCGACGTAAGAAAACAGAGATTAGAATTAATTGAAGAAATTAGAAAAGAAGGGAAGAATCCTTACCCTTACAGATT
CGATAAAGAAATGAAAGTTGAAGAAATTAAAGAAAAGTATGGAAATATTGAATCTGGTGAATTAAAAGAAGAGGAAGTTT
TTAAATTTGCCGGAAGAGTAATGTCAATTAGAAAACACGGTAAATCAGCATTTTTGGTTTTAAAAGACGATACAGGAAGA
ATTCAGGCGTATATTAGAAAAGATAAAGTTGGAGAAGAAAAATTCAATGAATTTAAGAAATATATGGATATTGGAGATTG
GGTTGGAGTAGAAGGATTCCCATTTAAAACTCATACAGGTGAGTTAACAATACTTGTTCTTGATTTTGAAATTTTATCAA
AAGCATTAAGACCATTACCGGAAAAATGGCATGGTTTAAAGGATAGAGAAGTTAGATATAGACAGAGATATGTAGATATG
ATAGCAAATGATGAAAGTTTAAAAACTTTTGTTACAAGATTCAAAGCAATTAGATATATCAGGGAATTTTTATATTCAAA
AGGATTTACAGAAGTAGAGACACCAACATTACACCCAATACTTGGTGGTGCAAATGCAAGACCATTTGTAACACATTTAA
ATGTTTATGATGTTGATATGTATTTGAGAATTGCTCCAGAATTATATTTAAAGAGATTAGTAGTGGGTGGAATGGAAAAA
ATATTTGAAATTGGTAAGAATTTCAGAAATGAGGGTGTTTCATATAAACACAATCCAGAATTTACAATGATGGAATTATA
TCAGGCTTATGCTGATTATACAGATATGATGAGAATAACAGAAGAAGTATTATCATATGTTGTTGAAAAAATACACGGAA
CAACAAAAATTGTGTATGATGGTGTAGAGATTGATTTTAAACCTCCGTTTAAAAGAGTAAAAATGAGAGATTTTATAAAA
GAACATCTTGGTGTTGATATATTAGAAGATCCAGATGAAAAGTTGTCTCAGGTATTAAAGGATCATGGAGTGGAAGTGGA
ATTTGAAGATAAAGCACATTATATAGATGAATTATGGTCATTGGTAGAGGATAAAATTGTACAACCAACATTTGTTTTAG
AACATCCTGTTGAAATTTCACCTCTTGCAAAAAGACATAGGGAAGATCCAAGGGTTACAGAAAGATTTGAATTAATAATA
TATGGAAGAGAACTTGCAAATGCATTTAGTGAATTAAATGATCCAGTTGATCAGCTTCAGAGATTTAAAAAACAGGTTGA
AATGAAGGAAAAAGGTGATGAAGAAGCACAAATGATGGATCTTGATTTCATTAGAGCGCTTGAATATGGATTACCTCCAA
CAGGTGGATTGGGAATAGGTATAGACAGATTTATTATGTTCTTAACAGGTGCTGAAACAATCAGGGATGTTATCCCGTAT
CCAATTGTTAGACCAATGAAATTTGAAGATGAAGAAAAATTAATGGAATCCGACGAATAA

Protein sequence :
MSDVRKQRLELIEEIRKEGKNPYPYRFDKEMKVEEIKEKYGNIESGELKEEEVFKFAGRVMSIRKHGKSAFLVLKDDTGR
IQAYIRKDKVGEEKFNEFKKYMDIGDWVGVEGFPFKTHTGELTILVLDFEILSKALRPLPEKWHGLKDREVRYRQRYVDM
IANDESLKTFVTRFKAIRYIREFLYSKGFTEVETPTLHPILGGANARPFVTHLNVYDVDMYLRIAPELYLKRLVVGGMEK
IFEIGKNFRNEGVSYKHNPEFTMMELYQAYADYTDMMRITEEVLSYVVEKIHGTTKIVYDGVEIDFKPPFKRVKMRDFIK
EHLGVDILEDPDEKLSQVLKDHGVEVEFEDKAHYIDELWSLVEDKIVQPTFVLEHPVEISPLAKRHREDPRVTERFELII
YGRELANAFSELNDPVDQLQRFKKQVEMKEKGDEEAQMMDLDFIRALEYGLPPTGGLGIGIDRFIMFLTGAETIRDVIPY
PIVRPMKFEDEEKLMESDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 5e-93 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Marpi_1818 YP_005097497.1 lysyl-tRNA synthetase VFG1668 Protein 3e-93 48