Gene Information

Name : Marpi_1745 (Marpi_1745)
Accession : YP_005097429.1
Strain : Marinitoga piezophila KA3
Genome accession: NC_016751
Putative virulence/resistance : Virulence
Product : chaperone ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1815610 - 1818108 bp
Length : 2499 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA)

DNA sequence :
ATGTTTGATAATTTTACAGATAGAGCTGCAAAAGTATTTATCGAAGCACAAAATGAAGCAAGATTTATGGGCCATCCATA
TGTTGGAACTGAACATTTATTACTTGGCTTATTAAAAGTTGGAGGAAAATATCTTTCTCAAATATTCTCATATTACAATC
TTACATATGGAAAAATAAAAGCCGAAATAACTAATATCGTTGGTGTAAATGCTACTCATAATATTGTTGGCGCTTCACCA
CAGCCAACTCCAAGAGCAAAAAGAATTATTGAATTAGCATACGATGAATCAGAAATCTTAGGAACAACGCAAATTGATGC
TGAACATCTATTACTTGGCATTTGTAGAGAAGGCGAAGGTATTGCTGCACATGTTTTAAGAAGAATAGGCATAAATCTTG
TTGAAATGAGAAAAAAACTTGCCGATTTAATGATGAATAAAGAAAAAAACGAAGAAACTGATATTACTATGTTTGAAGAA
GAAAATGAAGAAAAATTAAGACAAAAGCAAAATGCCATAAAACAATTAGAAGGATATGGTTCTGATCTCACCGAAAAAGC
TGCTAAAAATCTGCTCGATCCTATTATAGGAAGAGAAGTTGAAATTAGAAGAGTAATGGAAATTCTTGCAAGGAGAAAAA
AGAACAACCCTGTTTTAATTGGTGAAGCTGGTGTGGGAAAAAGTGCAATAGTTGAAGGATTAGCCGAAAGGATTGTAAAA
GGGGATGTTCCAGAAGTATTAAAAAATAAAAGTATTTTCTCGCTTGATTTAACCTCACTTGTTGCTGGAACAAAATACCG
TGGAGAATTTGAAAAAAGAATGAAAAAATTAATGCAAATTCTTGAAAAAAATAAAGACATAATCTTATTTATAGACGAAT
TGCATATGATAGTTGAAGCTGGAGCTGCAGAAGGATCTTCAATGGACGCTGCAAATGTTTTAAAACCAGCTTTAGCAAGT
GGAGATATAACTATAATCGGTGCAACCACACCTTCAGAGTATAGAAAATTTATAGAAAAAGATCCTGCATTGGAAAGAAG
ATTCCAGAAAATATATGTAAATGAACCAACATATGAAGAAGCAATTGAAATCTTAAAAGGAATAAAATCAAAATACGAAG
AACATCATAAGGTAAAATATACAAATGAAGCAATTGAAGCTGCTGTAAATCTTTCACTAAGGTATATTACAGATAGATTT
TTACCGGATAAAGCTGTTGATTTAATAGATGAAGCTGGTGCACGATCCAGATTAAATGCTTTAACATTACCAGCAAATCT
TAAAAAGATGCTAAATAAAATTTCTGAGCTTGAAAACAAAAAAGATTATTACGCTCAAAATGATGAGTATGACAAAATAG
AAGAAATAAAAACAGAATTGGTAAAATTAAAATCAAAATACAAAAAGAAATATAAAGAATGGCGCGAAAAAGCCGAAAAG
GAAATTATAGAAATCACAGATGAACATATATCTGAAGTTGTTTCTGATTGGACTGGCGTTCCACTTAAAAAGCTTGAAAT
GTCTGAAATGGAAAGATTGCTTAATCTTGAAGCTGTATTACACGAAAGAGTTATTGGTCAGGATGATGCAATAAAAGCCG
TTTCCAAGGCAATTAGAAGAGCAAGAAGCGGAATCAAAGATCCAAAAAGACCAACAGGAGTATTTTTATTCCTTGGACCA
ACAGGAGTTGGTAAAACAGAATTGGCAAAAACAATTGCTGAATATCTTTTCGGAGATGAAAAGGCACTTGTTAGAATTGA
TATGTCTGAATACATGGAAAAATTCAATGTTTCAAGACTTGTTGGAGCACCTCCAGGATATGTTGGATATGAAGAAGGAG
GTCAGCTTACAGAGGCTGTAAGAAGAAGACCATATTCTGTAATACTTCTTGACGAAATAGAAAAGGCACATCCTGATGTA
TATAACTTATTATTACAGATAATGGATGATGGAAGATTAACTGATTCACAGGGAAGAATTGTGGACTTTAGAAACTCTAT
AATTATCATGACAAGTAATCTTGGAAGTGAATCAATTAATAAATCAAAACGTTCAATGGGATTTGTCGATGAAGAATCAG
AAGAGAAAAAATACAAAGAAATAAAACTATCTGTAATGGAAGAAGTTAGAAAAGCCTTTAAACCTGAATTCTTAAACAGA
CTTGATGAAACAGTAGTATTCCATCCATTAACCAAAGAACATATGAAAGAAATTATAAAAATTCAATTAAATGATCTTGA
AAAAAGACTTAAAGAAAAGGACTTACACATTAAAATAAAAGATTCAGCTGTAGAATTATTAATTGAAAAAGGATTCGATC
CTATCTTTGGCGCAAGACCTCTAAAAAGAGCCATTCAAAGATATCTTGAAGATCCGCTTTCAGAAGAAATATTAAGAGGA
AGATTTAAAGAAGGAGACAAAATAATAATAGATACTAAAAACGGCGAAATACACTTTAAAAAAGGACGAAGTTCTAAACC
AAAACAGAAGGTGTCATAA

Protein sequence :
MFDNFTDRAAKVFIEAQNEARFMGHPYVGTEHLLLGLLKVGGKYLSQIFSYYNLTYGKIKAEITNIVGVNATHNIVGASP
QPTPRAKRIIELAYDESEILGTTQIDAEHLLLGICREGEGIAAHVLRRIGINLVEMRKKLADLMMNKEKNEETDITMFEE
ENEEKLRQKQNAIKQLEGYGSDLTEKAAKNLLDPIIGREVEIRRVMEILARRKKNNPVLIGEAGVGKSAIVEGLAERIVK
GDVPEVLKNKSIFSLDLTSLVAGTKYRGEFEKRMKKLMQILEKNKDIILFIDELHMIVEAGAAEGSSMDAANVLKPALAS
GDITIIGATTPSEYRKFIEKDPALERRFQKIYVNEPTYEEAIEILKGIKSKYEEHHKVKYTNEAIEAAVNLSLRYITDRF
LPDKAVDLIDEAGARSRLNALTLPANLKKMLNKISELENKKDYYAQNDEYDKIEEIKTELVKLKSKYKKKYKEWREKAEK
EIIEITDEHISEVVSDWTGVPLKKLEMSEMERLLNLEAVLHERVIGQDDAIKAVSKAIRRARSGIKDPKRPTGVFLFLGP
TGVGKTELAKTIAEYLFGDEKALVRIDMSEYMEKFNVSRLVGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEIEKAHPDV
YNLLLQIMDDGRLTDSQGRIVDFRNSIIIMTSNLGSESINKSKRSMGFVDEESEEKKYKEIKLSVMEEVRKAFKPEFLNR
LDETVVFHPLTKEHMKEIIKIQLNDLEKRLKEKDLHIKIKDSAVELLIEKGFDPIFGARPLKRAIQRYLEDPLSEEILRG
RFKEGDKIIIDTKNGEIHFKKGRSSKPKQKVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Marpi_1745 YP_005097429.1 chaperone ATPase VFG0079 Protein 0.0 52
Marpi_1745 YP_005097429.1 chaperone ATPase VFG0080 Protein 7e-149 51