Gene Information

Name : Marpi_1345 (Marpi_1345)
Accession : YP_005097046.1
Strain : Marinitoga piezophila KA3
Genome accession: NC_016751
Putative virulence/resistance : Virulence
Product : nucleoside-diphosphate sugar epimerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1393590 - 1395434 bp
Length : 1845 bp
Strand : +
Note : PFAM: CoA binding domain; Polysaccharide biosynthesis protein

DNA sequence :
ATGAAAAGAAAAGCACTTTTGATGGTTCTTGATTATATTATATTTTTTGTAAGTTATATAATAGCCCTATTTTTCAGATT
TCAAACTGACTATGTTGAAATGGAAAAGTATATATTGCCGATATTTTTGTTTCCGGCAATAATGATTCTGGTTATGTATG
TGAATAAAATATATGACCAGATATGGAGATTTGCTACTTTAAAGGAAATAAAGCCTATTGTATATTCAGCATTTACGGGA
TATCTTTTAAATTTTCTTGTTGTTGAGGCAATTAGAAGACTATTTTTTAAATCTTTTTCATTGCCTCTTACAGTAGGGTT
TATAACTGCCCTTTTAGGAAGTATTCTGGTTATTGGGAGCAGGACATGGTGGTTTTCAAAGAATAAACATATAGAAAATC
ATTATCCTGATAATAGAAAGAATATTCTTATTATTGGTGCTGGTGAAGCCGGGGTTGAATTGCTGGATGAGTTTTTAAGA
AATCCAGAAAATGGTGTTGTTAAAGGATTTTTGGATGATGATGAAATTAAGATTGGAAGATTAATAAGAGGGATTCCTGT
TTTAGGGAAAACAAATGAAGTAATGGATTATGTTGAAAAGCTAAAAATAAATGAGGTTATAATTGCTATTCCTTCCGCAA
CATCAGAGGAATTAAAGAGGATTATTAGTAATATTGATACAAAACGAGTTAGATTAAAAACATTACCAGGTTTGTTTGAG
ATATTAAATAATAAAGTATCGTTGGGATTTTTAAGGGATGTTAATATAGAGGATTTGCTTGGTAGAAAGGAAATAAAGGT
TAATTTTGATGAAATAGGTTTTTATATAACCAATAAAACTGTTTTGGTTACAGGTGCTGGCGGTAGTATTGGTTCTGAAA
TTTGTCGTCAGGTTGCAGCGTTAAATCCTGAGAAATTATTGATTTTAGGTCGTGGTGAAAATAGCATATTTAAAATAAAC
AGGGAATTAAAAGAAAAGTTCCCTAATTTAAAAGTTGTTGAAATTATCAGCGATGTAACCAATGAAGATAGAATGGAAGA
GGTATTTAAAAGATTTTCGCCAGATGTTGTTTTTCATGCTGCCGCACATAAGCATGTTCCCTTAATGGAAAAGAACCCTT
CTGAGGCTTTTAGGGTTAATTCATATGGGACTTATATACTCGCCAGGTTGTCAGATAAATATGATGTTTCACATTTTGTT
TTTATTTCAACTGATAAGGCAATAAATCCAACATCTATTATGGGAAGTTCCAAACGACTTGGAGAAATAATAATCAGGTC
TATTTCCAGAAGGTCAAAGACACATTTTGGAATTGTTAGATTTGGAAATGTTCTGGGAAGTAGAGGCAGCGTTGTGCCGA
TTTTTAAAGAACAAATAAAAAATGGTGGTCCTGTGACAGTTACACATCCAGATATGAAAAGATATTTTATGACTATACCT
GAAGCTGTAGCATTGGTATTGCAAGCAGGAGCTTTTGCAAATAAGGGAGAAGTATTTGTGTTTGATATGGGAAAACCTAT
ATCCATAGATTATCTTGCACGAGAGATGATAAGATTATCCGGGTATATTCCAGATCAGGATATTAAAATTGTCTATACAG
GAATAAGGAATGGTGAAAAATTATATGAGGAATTATTTCTGGATTCTGAAGAGTTTTTAAAAACGCCAAATGATAGAATA
TATATTTTAAAAGAGAATAAGATTTTAAATGAGAAAGAATTAGATAATTTGATTTTAAAAATAGAAAGAACCTTTAAAGC
TAATGATTTTAAACTTATGAATAGTATAATAAAAGAATATATTCCAGAGGCAACTGCAAAGGTTATAATAGATGTTGCAT
ATTAA

Protein sequence :
MKRKALLMVLDYIIFFVSYIIALFFRFQTDYVEMEKYILPIFLFPAIMILVMYVNKIYDQIWRFATLKEIKPIVYSAFTG
YLLNFLVVEAIRRLFFKSFSLPLTVGFITALLGSILVIGSRTWWFSKNKHIENHYPDNRKNILIIGAGEAGVELLDEFLR
NPENGVVKGFLDDDEIKIGRLIRGIPVLGKTNEVMDYVEKLKINEVIIAIPSATSEELKRIISNIDTKRVRLKTLPGLFE
ILNNKVSLGFLRDVNIEDLLGRKEIKVNFDEIGFYITNKTVLVTGAGGSIGSEICRQVAALNPEKLLILGRGENSIFKIN
RELKEKFPNLKVVEIISDVTNEDRMEEVFKRFSPDVVFHAAAHKHVPLMEKNPSEAFRVNSYGTYILARLSDKYDVSHFV
FISTDKAINPTSIMGSSKRLGEIIIRSISRRSKTHFGIVRFGNVLGSRGSVVPIFKEQIKNGGPVTVTHPDMKRYFMTIP
EAVALVLQAGAFANKGEVFVFDMGKPISIDYLAREMIRLSGYIPDQDIKIVYTGIRNGEKLYEELFLDSEEFLKTPNDRI
YILKENKILNEKELDNLILKIERTFKANDFKLMNSIIKEYIPEATAKVIIDVAY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 6e-82 44
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 7e-85 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Marpi_1345 YP_005097046.1 nucleoside-diphosphate sugar epimerase VFG1300 Protein 5e-87 42