Gene Information

Name : clpE (SMA_0571)
Accession : YP_005094269.1
Strain : Streptococcus macedonicus ACA-DC 198
Genome accession: NC_016749
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease, ATP-binding subunit ClpE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 575965 - 578250 bp
Length : 2286 bp
Strand : -
Note : -

DNA sequence :
ATGCTCTGTCAAAATTGTCATTTAAACGAATCAACAATTCATCTTTATACAAATGTCAATGGTCAGCAAAAGCAAATTGA
TTTGTGCCAAAACTGCTATCAAATCATGAAAACTGACCCTAACAATACTATTTTAAGTGGTTTAAGAGATGCAACAGCTT
CTTTCACACAAAATCAATCTACTGGTATGAATCCTTTTGATGATTTCTTCAGTAATTTGAATAATTTCCACGCATTCGGT
GGACAAGATTTCCAAAATACGCCTCCAACACAATCAGGTGGTGGAAATAACGGCGGCAATAATAACAATTATCGTCCAAA
CGGCGCAGCTAGCCAACAACAACAAAAAGGTTTGCTAGAAGAATTTGGTATCAACGTTACTGATATTGCTCGTCGCGGTG
ACATCGACCCTGTCATTGGGCGTGATGCCGAAATCATTCGTGTGATTGAAATTCTTAACCGTCGTACAAAAAATAATCCT
GTTCTTATTGGTGAACCTGGGGTTGGTAAAACAGCCGTTGTTGAAGGATTAGCTCAAAAAATCATAGATGGTGACGTTCC
ACAAAAACTTCAAAATAAAGAAGTTATTCGTCTTGATGTCGTTAGCCTTGTACAAGGAACAGGTATTCGTGGTCAATTTG
AAGAACGTATGCAAAAACTCATGGAAGAAATCCGTGAACGTAAGGACGTTATTCTCTTCATTGACGAAATTCACGAAATT
GTCGGTGCTGGTTCTGCAGGCGACGGTAACATGGACGCTGGTAATATTTTAAAACCAGCACTTGCTCGTGGTGAACTTCA
ATTAGTTGGTGCTACGACACTCAATGAATACCGCATTATTGAAAAAGATCCAGCACTTGAACGCCGTATGCAACCTGTCA
AAGTTAATGAACCAAGCGTGGAAGAAACGATTACGATTCTTCGTGGTATTCAAAAGAAATACGAAGATTATCATCATGTC
AAATACAGCGATGATGCAATTGAGGCTGCCGCAAATCTTTCTAACCGTTACATTCAAGACCGCTTCCTCCCAGATAAAGC
CATTGATTTGCTAGACGAAGCTGGTTCTAAGATGAATTTAACCCTTAACTTTGTTGACCCACAAGAAATCGACAAGCGTT
TAGCGGAAGCTGAAAACCTAAAAACACAAGCTACTCGCGAGGAAGATTATGAACGCGCAGCTTATTTCCGTGACCAAATC
GCTAAATACAAGGAAATGCAACAACAAACAATCAACGAAGACGATATTCCAGTTATTACTGAAAAGACTATCGAAGCTAT
CGTTGAAGAAAAAACTAACATTCCTGTTGGTGATTTGAAAGAAAAGGAACAATCACAATTAATCAATCTCGCTGATGATT
TGAAAACACACGTCATTGGTCAAGATGATGCCGTTGACAAAATTGCCAAAGCCATTCGTCGTAACCGTGTCGGTCTCGGT
ACACCAAATCGTCCAATCGGTTCATTCCTCTTTGTTGGACCAACTGGTGTTGGTAAAACAGAACTTTCTAAACAATTAGC
GATTGAACTTTTCGGCTCAGCTGACAACATGATTCGTTTCGATATGTCTGAATACATGGAAAAACATGCGGTCGCTAAAC
TTGTTGGAGCACCTCCAGGATACGTTGGTTACGAAGAAGCTGGTCAATTGACAGAAAAAGTTCGCCGTAATCCATACTCA
CTCATCCTTCTTGACGAAGTTGAAAAAGCGCATCCTGATGTTATGCATATGTTCTTGCAAGTTCTTGATGACGGTCGTTT
GACTGACGGTCAAGGTCGTACAGTAAGCTTCAAAGATACTATTATTATCATGACTTCTAATGCTGGTACTGGTAAAACAG
AAGCTTCAGTTGGTTTCGGTGCTGCTCGTGAAGGACGTACAAATTCTGTCCTTGGTGAACTTAGCAACTACTTCAGCCCT
GAATTCATGAACCGTTTCGACGGTATTATCGAATTTAAGGCTCTTAGCAAGGACAATCTTTTCCAAATTGTTAACCTTAT
GCTTGACGATGTCAATAAACGTCTAGCAACTAACGATATTCACCTCGAAGTCACTGATAAGGTAAAAGAAAAATTAGTTG
AACTTGGCTACGATCCTAAAATGGGAGCTCGTCCATTACGTCGTACTATCCAAGACCACATTGAAGATGCCATTACAGAC
TTCTATCTTGAAAATCCAAGCGAAAAAGATTTGAAAGCTGCTATGACAAGCAATGATAAAATTATCATCAAATCTGATAA
AAAGGTTGAAAAAGAAGAAACAACCGTTTCAGCAGAATCAGAATAA

Protein sequence :
MLCQNCHLNESTIHLYTNVNGQQKQIDLCQNCYQIMKTDPNNTILSGLRDATASFTQNQSTGMNPFDDFFSNLNNFHAFG
GQDFQNTPPTQSGGGNNGGNNNNYRPNGAASQQQQKGLLEEFGINVTDIARRGDIDPVIGRDAEIIRVIEILNRRTKNNP
VLIGEPGVGKTAVVEGLAQKIIDGDVPQKLQNKEVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRERKDVILFIDEIHEI
VGAGSAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDPALERRMQPVKVNEPSVEETITILRGIQKKYEDYHHV
KYSDDAIEAAANLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPQEIDKRLAEAENLKTQATREEDYERAAYFRDQI
AKYKEMQQQTINEDDIPVITEKTIEAIVEEKTNIPVGDLKEKEQSQLINLADDLKTHVIGQDDAVDKIAKAIRRNRVGLG
TPNRPIGSFLFVGPTGVGKTELSKQLAIELFGSADNMIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEKVRRNPYS
LILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKTEASVGFGAAREGRTNSVLGELSNYFSP
EFMNRFDGIIEFKALSKDNLFQIVNLMLDDVNKRLATNDIHLEVTDKVKEKLVELGYDPKMGARPLRRTIQDHIEDAITD
FYLENPSEKDLKAAMTSNDKIIIKSDKKVEKEETTVSAESE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-153 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpE YP_005094269.1 ATP-dependent Clp protease, ATP-binding subunit ClpE VFG0080 Protein 0.0 58
clpE YP_005094269.1 ATP-dependent Clp protease, ATP-binding subunit ClpE VFG0079 Protein 2e-161 53