Gene Information

Name : copB (SMA_1965)
Accession : YP_005095539.1
Strain : Streptococcus macedonicus ACA-DC 198
Genome accession: NC_016749
Putative virulence/resistance : Resistance
Product : lead, cadmium, zinc and mercury transporting ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1899065 - 1901182 bp
Length : 2118 bp
Strand : -
Note : -

DNA sequence :
ATGAGGAATAACAAAAAACATTCGTCACATAGTCATCATAATCACGGTGACATGGATCACTCAAAACACGACCATAATGA
AATGGAACATAGTCAGATGGATCACAGTCAGATGGATCACAGCAAGATGAATCATAGTGCGATGGATCACAGTGAAATGG
ATCATGGCGCAATGGGAGGGCATGCCCACCACCATCACGGTAGCTTTAAGGAGATTTTCTTGAAGTCACTCCCATTAGGA
ATTGCAATCTTACTCATTACGCCTATGATGGATATTCAGTTGCCTTTCCAAATTATCTTTCCTTATGCAGACGTTGTAGC
AGCTGTATTGGCAACAATTCTATACATTTATGGCGGAAAACCATTCTACATGGGTGCGAAAGATGAGTTTAATTCAAAAG
CTCCAGGCATGATGTCCTTGATTACTTTGGGAATAACGGTTTCTTATGCCTATAGTGTTTACGCAGTGGCCGCTCGATAT
GTGACCGGAGAACATGTCATGGACTTCTTCTTTGAGTTTACAACGTTAATTTTAATCATGTTATTAGGACACTGGATTGA
AATGAAGGCATTGGGTGAAGCAGGGGACGCGCAAAAAGCATTGGCTGAGTTGGTGCCGAAAGATGCTCATGTTGTTTTAG
AAGACGATTCGATTGAGACTCGCCCTGTGTCTGAACTTCAGATTGGAGATGTTATCCGTGTTCAAGCAGGAGAAAATGTT
CCAGCTGATGGTATCATTATCCGCGGAGAATCCCGTGTAAACGAAGCGCTTGTGACTGGGGAATCGAAACCAATTGAAAA
AAAACCCGGAGATGAGGTCATCGGTGGATCAACCAATGGTGGCGGAGTCCTCTATGTGGAAATAAAGCAGACGGGCGATA
AGTCCTTCATTTCTCAGGTTCAGACATTAATCAGCCAAGCACAAAGCCAACCATCTCGAGCAGAGAATGTGGCTCACAAA
GTAGCTAGCTGGTTGTTCTACATTGCCGTTGTAGTAGCTTTAATCGCTCTAGTAGTCTGGATGATCATTGCGGATCTGCC
TACAGCCGTTATCTTTACTGTGACTGCGTTAGTTATTGCCTGCCCACATGCTTTGGGTCTTGCTATTCCCTTGGTAGTAT
CACGTAGTACTAGTTTGGGTGCAAGCCGAGGATTACTGGTTAAAAATAGAGAAGCTTTGGAATTAACTACTAAAGCGGAT
GTTATGGTATTGGATAAAACAGGTACTTTAACAACTGGTGAATTTAAAGTGTTGGACGTCACTGTTTTGAGTGATAAATA
TTCTGAAGAAGAAATTACAGGCTTGTTGGCGGGTATAGAGGCGGGCTCCAGTCACCCGATTGCCCAATCGATTGTGAACC
ACGCTGAAGCGAAAGGCATTAAGTCAGTTTCCTTTGACTCCATTGAAATCGTTTCGGGAGCAGGAATAGAAGGGGAGGCG
AACGGCCACCACTATCAATTAATCAGCCAAAAGGCATACGGAAAAGCATTGCGTATGGATATTCCGAAAGGCGCTACTTT
AAGTATCCTTGTAGAAAATAATGAAGCAATCGGCGCTGTCGCATTGGGAGATGAACTGAAAGAAACTAGCAGAAACTTGA
TCGAGGTGCTGAAAAAATACGGAATTGAACCACTCATGGCTACTGGTGATAACGAGGAAGCTGCACAAGGAGTTGCAGAA
GTTCTAGGTATTCAATACCAAGCCAATCAATCTCCGAAAGATAAGTACAAGCTGGTCGAGTCCATGAAAAACCAAAACAA
GACGGTTATCATGGTGGGAGACGGGGTCAATGACGCACCTTCCCTTGCCTTGGCAGACGTAGGTATTGCAATCGGAGCTG
GAACGCAAGTAGCTTTGGATTCTGCGGATATTATCCTTACTCAGTCTGATCCAGGGGATATTGAATCCTTTATCGAGTTA
GCAAACAAGACGACACGTAAAATGAAACAAAACTTGGTATGGGGAGCAGGGTATAACTTTATCGCGATCCCAATAGCTGC
AGGAATACTAGCACCAATTGGCATAACATTAAGTCCAGCAGTCGGTGCCGTCCTGATGTCACTTTCGACTGTAATTGTTG
CCATCAATGCTATGACATTGAAATTAGAGCCAAAATAA

Protein sequence :
MRNNKKHSSHSHHNHGDMDHSKHDHNEMEHSQMDHSQMDHSKMNHSAMDHSEMDHGAMGGHAHHHHGSFKEIFLKSLPLG
IAILLITPMMDIQLPFQIIFPYADVVAAVLATILYIYGGKPFYMGAKDEFNSKAPGMMSLITLGITVSYAYSVYAVAARY
VTGEHVMDFFFEFTTLILIMLLGHWIEMKALGEAGDAQKALAELVPKDAHVVLEDDSIETRPVSELQIGDVIRVQAGENV
PADGIIIRGESRVNEALVTGESKPIEKKPGDEVIGGSTNGGGVLYVEIKQTGDKSFISQVQTLISQAQSQPSRAENVAHK
VASWLFYIAVVVALIALVVWMIIADLPTAVIFTVTALVIACPHALGLAIPLVVSRSTSLGASRGLLVKNREALELTTKAD
VMVLDKTGTLTTGEFKVLDVTVLSDKYSEEEITGLLAGIEAGSSHPIAQSIVNHAEAKGIKSVSFDSIEIVSGAGIEGEA
NGHHYQLISQKAYGKALRMDIPKGATLSILVENNEAIGAVALGDELKETSRNLIEVLKKYGIEPLMATGDNEEAAQGVAE
VLGIQYQANQSPKDKYKLVESMKNQNKTVIMVGDGVNDAPSLALADVGIAIGAGTQVALDSADIILTQSDPGDIESFIEL
ANKTTRKMKQNLVWGAGYNFIAIPIAAGILAPIGITLSPAVGAVLMSLSTVIVAINAMTLKLEPK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 3e-89 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
copB YP_005095539.1 lead, cadmium, zinc and mercury transporting ATPase BAC0383 Protein 0.0 89
copB YP_005095539.1 lead, cadmium, zinc and mercury transporting ATPase BAC0079 Protein 3e-130 50
copB YP_005095539.1 lead, cadmium, zinc and mercury transporting ATPase BAC0629 Protein 3e-98 45