Gene Information

Name : SMA_1742 (SMA_1742)
Accession : YP_005095341.1
Strain : Streptococcus macedonicus ACA-DC 198
Genome accession: NC_016749
Putative virulence/resistance : Virulence
Product : Response regulator CsrR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1689900 - 1690592 bp
Length : 693 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTAAAAAGATTTTAATTATTGAAGATGAAAAAAATCTTGCACGTTTTGTATCTTTAGAGTTGCAACATGAAGGTTA
TTCAGTAGTAGTAGAAAATAATGGACGACTTGGCCTACAAACAGCTCTAGATGATGATTTTGATTTAATTTTGTTAGACT
TGATGCTTCCAGATATGGATGGTTTTGAAATTACACGCCGTCTTCGATTAGGAAAAGAGACTTCTATTATTATGATGACA
GCTCGTGATTCAATTATGGATGTTGTTGCTGGGCTTGATCGTGGTGCAGATGACTATATTGTTAAACCATTTGCAATTGA
AGAATTGTTAGCTCGTGTCCGTGCTGTTTTTCGTCGTCAAGATGTTGAATCTAAGCGTGAACAAGATAGTCGAGGAAAAG
AAGGGCTACTTGGACTACGCTTAAACCCTCAAAATCGTTCTGCTGTTCGAGGTGATGATGAAATTTCACTTACAAAACGT
GAATATGATTTGCTAAGTGTTCTTTTATCAAATGTTAATCGTGTAATGACACGTGAAGAATTATTGTCTAGTGTTTGGAG
ATATGATACAGATATTGAGACAAATGTTGTTGATGTTTATATCCGTTACCTTCGCGGAAAAGTCGATATTCCAGGTAAAG
AATCTTACATTCAAACAGTTCGTGGAATGGGATACATTATTCGAGAAAAATAA

Protein sequence : 
MSKKILIIEDEKNLARFVSLELQHEGYSVVVENNGRLGLQTALDDDFDLILLDLMLPDMDGFEITRRLRLGKETSIIMMT
ARDSIMDVVAGLDRGADDYIVKPFAIEELLARVRAVFRRQDVESKREQDSRGKEGLLGLRLNPQNRSAVRGDDEISLTKR
EYDLLSVLLSNVNRVMTREELLSSVWRYDTDIETNVVDVYIRYLRGKVDIPGKESYIQTVRGMGYIIREK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-24 44
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 7e-24 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SMA_1742 YP_005095341.1 Response regulator CsrR HE999704.1.gene1528. Protein 2e-44 57
SMA_1742 YP_005095341.1 Response regulator CsrR AE015929.1.gene1106. Protein 2e-37 53
SMA_1742 YP_005095341.1 Response regulator CsrR NC_002951.3238224.p0 Protein 1e-38 52
SMA_1742 YP_005095341.1 Response regulator CsrR NC_007793.3914065.p0 Protein 1e-38 52
SMA_1742 YP_005095341.1 Response regulator CsrR NC_002758.1121390.p0 Protein 1e-38 52
SMA_1742 YP_005095341.1 Response regulator CsrR NC_010079.5776364.p0 Protein 1e-38 52
SMA_1742 YP_005095341.1 Response regulator CsrR NC_002952.2859858.p0 Protein 1e-38 52
SMA_1742 YP_005095341.1 Response regulator CsrR NC_007622.3794948.p0 Protein 1e-38 52
SMA_1742 YP_005095341.1 Response regulator CsrR NC_003923.1003417.p0 Protein 1e-38 52
SMA_1742 YP_005095341.1 Response regulator CsrR NC_013450.8614146.p0 Protein 1e-38 52
SMA_1742 YP_005095341.1 Response regulator CsrR BAC0308 Protein 2e-22 41
SMA_1742 YP_005095341.1 Response regulator CsrR BAC0125 Protein 1e-23 41
SMA_1742 YP_005095341.1 Response regulator CsrR NC_012469.1.7685629. Protein 1e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SMA_1742 YP_005095341.1 Response regulator CsrR VFG0596 Protein 8e-25 44
SMA_1742 YP_005095341.1 Response regulator CsrR VFG1390 Protein 4e-31 42