Gene Information

Name : lysS (SMA_1534)
Accession : YP_005095143.1
Strain : Streptococcus macedonicus ACA-DC 198
Genome accession: NC_016749
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1510058 - 1511548 bp
Length : 1491 bp
Strand : +
Note : -

DNA sequence :
ATGTCAAACGAACACATTGAAGAATTAAACGACCAACAAATCGTGCGTCGTGAAAAAATGGCAGCTTTGGCTGAACAAGG
CATCGATCCTTTCGGAACTCGATTTGAACGCACAGCTACTTCTGGTCAATTAAAAGAAAAATACGCTGACAAAACTAAAG
AAGAATTGCATGAAATTAACAAAACAGCTACTATCGCTGGTCGTCTAATGACTAAGCGTGGTAAAGGTAAAGTTGGTTTT
GCACACATTCAAGACCGCGACGGTCAAATCCAAGTCTATGTCCGCAAAGATGCTGTCGGTGACGAAAACTATCAAATTTT
CAAAAAAGCAGACCTCGGTGACTTCCTCGGTATCGAAGGTGAAATCATGCGTACAGACATGGGTGAATTGACAATCAAAG
CCACTCACCTTACTCACTTGTCTAAAGCGCTTCGTCCACTCCCAGAAAAATTCCATGGACTTACAGACGTTGAAACTAAA
TATCGTAAACGTTACCTTGACTTGGTTTCAAACCGTGAAAGCTTTGAACGCTTTGTGACTCGTTCAAAAATCATCTCAGA
AATCCGTCGTTACCTTGAAGGTCTTGGTTTCTTAGAAGTTGAAACACCAGTCCTTCACAACGAAGCTGGTGGTGCTGCTG
CTCGCCCATTTATCACTCACCACAATGCACAAGATATGGACATGGTTCTTCGTATCGCAACTGAACTTCACTTGAAACGT
CTTATCGTTGGTGGTATGGAAAGAGTGTACGAAATTGGACGTATCTTCCGTAACGAAGGTATGGATGCCACACACAATCC
TGAATTCACAACTATCGAAGTTTATCAAGCCTATGCTGACTTCAAAGATATCATGGATTTGACAGAAGGCATTATCCAAC
ACGCCTCAAAAGCTGTTAAAGGTGACGGTCCTATTTCATACCAAGGAACTGAAATTGCCATTGACAAACCATTTAAACGT
GTTCACATGGTTGATGCTATCAAAGAAGTCACTGGTGTTGATTTCTGGCAAGAAATGACTCTCGAAGAAGCGCAAGCTAT
TGCCAAAGAGAAAAATGTACCAGTTGAAAAACACTTCACTTCAGTTGGTCACATCATCAACGCTTTCTTTGAAGAATTTG
TCGAAGAAACATTGATTCAACCAACATTTGTTTATGGACACCCAGTTGAAGTTTCTCCTCTTGCTAAGAAAAACGCAGAA
GATCCTCGCTTCACTGACCGCTTCGAACTCTTCATCATGACTAAAGAATACGGTAATGCCTTTACCGAACTTAACGATCC
AATCGATCAATTGTCACGTTTTGAAGCCCAAGCAAAAGCTAAAGAACTTGGTGATGATGAAGCAACTGGAATTGACTACG
ACTACGTCGAAGCCCTTGAATACGGTATGCCACCAACAGGGGGACTTGGTATCGGTATCGACCGCCTAGTCATGCTCCTC
ACAGACACAACAACAATCCGCGACGTCTTACTTTTCCCAACGATGAAATAA

Protein sequence :
MSNEHIEELNDQQIVRREKMAALAEQGIDPFGTRFERTATSGQLKEKYADKTKEELHEINKTATIAGRLMTKRGKGKVGF
AHIQDRDGQIQVYVRKDAVGDENYQIFKKADLGDFLGIEGEIMRTDMGELTIKATHLTHLSKALRPLPEKFHGLTDVETK
YRKRYLDLVSNRESFERFVTRSKIISEIRRYLEGLGFLEVETPVLHNEAGGAAARPFITHHNAQDMDMVLRIATELHLKR
LIVGGMERVYEIGRIFRNEGMDATHNPEFTTIEVYQAYADFKDIMDLTEGIIQHASKAVKGDGPISYQGTEIAIDKPFKR
VHMVDAIKEVTGVDFWQEMTLEEAQAIAKEKNVPVEKHFTSVGHIINAFFEEFVEETLIQPTFVYGHPVEVSPLAKKNAE
DPRFTDRFELFIMTKEYGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLL
TDTTTIRDVLLFPTMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 1e-111 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lysS YP_005095143.1 lysyl-tRNA synthetase VFG1668 Protein 6e-112 47