Gene Information

Name : GU3_00490 (GU3_00490)
Accession : YP_005090605.1
Strain : Oceanimonas sp. GK1
Genome accession: NC_016745
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 103005 - 103820 bp
Length : 816 bp
Strand : -
Note : COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

DNA sequence :

ATGAATGCATTTACCCCTTTGTCGTCCGTGGTGGCCGAGCCGGCGCTGGAAGCCCGTGCGCTCAGCGTCGGCCATGACGC
CACCCTGGTGCTGGACGGCCTTGACCTGCAACTGCGGCCCGGGCGGGTGACCGCCATCGTCGGCCCCAATGGCTGTGGCA
AGTCGACCCTGCTCAATACCCTGGGCAGGGTGCTGCGCCCGGCTGCCGGCCAGGTATTGCTGCGCGGAGAGGATATTCGC
CGCAAGCCCGGCCGTGAGCTGGCCCGGGAGCTGGCTCTGTTGCCCCAGCACAGCGCGGCCCCGGAGGGCATGACGGTGCT
GGATCTGGTCCGGTTTGGCCGCCAGCCCCATCAAGGCTGGCTGCAGCAATGGTCGGAGCAGGATCAGGCGGCGGTGGCCG
ACGCCCTGGCCGCGGCGGATGTGCTGGAGCTACAACACCGGGAGCTGGACCGGCTGTCGGGTGGCCAGCGTCAGCGGGCC
TGGATTGCCATGGCCATGGCCCAGTCCACGCCCTTGCTGCTGCTGGACGAACCCACCTCGGCGCTGGATCTGGGTCATCA
GATTGAAGTGTTCGAGCTGATCCGGCGCCTGGCGGGCCGGGGCAAGACAGTGGTCATGGTGGTGCATGACTTGATCAACG
CCTGCCGCTATGCGGATGAGCTGGTGGCCATGCACCAGGGCAAGGTGGTCGCCGCTGGCGCTCCCGGCGAGGTACTGACC
TCGGCCCTGGTGCGGCAATTGTACCAGGTGGACTGTGACATCATGGCGGATCCGGCCACCGGCAGCCCCATGCTGGTGAA
TGTGCGCCGTGGCTGA

Protein sequence :

MNAFTPLSSVVAEPALEARALSVGHDATLVLDGLDLQLRPGRVTAIVGPNGCGKSTLLNTLGRVLRPAAGQVLLRGEDIR
RKPGRELARELALLPQHSAAPEGMTVLDLVRFGRQPHQGWLQQWSEQDQAAVADALAAADVLELQHRELDRLSGGQRQRA
WIAMAMAQSTPLLLLDEPTSALDLGHQIEVFELIRRLAGRGKTVVMVVHDLINACRYADELVAMHQGKVVAAGAPGEVLT
SALVRQLYQVDCDIMADPATGSPMLVNVRRG

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
iusE	YP_005143742.1	iron ABC transporter ATP-binding protein	Virulence	Not named	Protein	5e-51	47
fecE	AAL08451.1	ATP-binding protein FecE	Virulence	SRL	Protein	4e-51	46
fagC	YP_005682397.1	ATP binding cytoplasmic membrane protein	Virulence	PiCp 1	Protein	4e-48	46
fagC	YP_005684488.1	ATP binding cytoplasmic membrane protein	Not tested	PiCp 1	Protein	4e-48	46
fagC	YP_005680307.1	ATP binding cytoplasmic membrane protein	Not tested	PiCp 1	Protein	4e-48	46
fagC	YP_003782430.1	ABC transporter ATP-binding protein	Not tested	PiCp 1	Protein	4e-48	46
DIP0585	NP_938961.1	iron ABC transporter ATP-binding protein	Virulence	Not named	Protein	2e-46	42
ciuD	YP_003783391.1	iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	2e-47	41
ciuD	YP_005685432.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	2e-47	41
ciuD	YP_005681255.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	2e-47	41
ciuD	YP_005683346.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	2e-47	41
CDCE8392_1767	YP_005134301.1	iron complex transport system ATP-binding protein	Virulence	Not named	Protein	1e-28	41

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
GU3_00490	YP_005090605.1	ABC transporter	BAC0164	Protein	3e-51	46

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
GU3_00490	YP_005090605.1	ABC transporter	VFG1042	Protein	3e-51	46
GU3_00490	YP_005090605.1	ABC transporter	VFG0925	Protein	2e-50	46