Gene Information

Name : GU3_02030 (GU3_02030)
Accession : YP_005090913.1
Strain : Oceanimonas sp. GK1
Genome accession: NC_016745
Putative virulence/resistance : Virulence
Product : iron ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 418014 - 418910 bp
Length : 897 bp
Strand : -
Note : COG1121 ABC-type Mn/Zn transport systems, ATPase component

DNA sequence :
ATGAGCACCATCGACACCCTGGCGGCCACCCCCGACGGCGCCGGCATGGTGGTGCAGCAGGTCACCGTCACCTACCGCAA
CGGCCATACCGCCCTGCGCGACGCCAGCTTTCACCTGCCCCTGGGCACCATTGCCGCCCTGGTGGGGGTGAACGGCTCCG
GCAAGTCGACCCTGTTCAAGGCCATCATGGGCTTTGTGCGGCTGGCGAGTGGCGATATTCGTGTGCTGGGCCAGCCGGTG
GCGGCGGCGCTGCGGGGCAACGCGGTGGCCTATGTGCCTCAGTCCGAGGAGGTGGACTGGCATTTTCCGGTGCGGGTGGA
GGATGTGGTGATGATGGGCCGCTACGGCCACATGGGCCTGCTGCGCCGGCCGAAAGCCGCGGATCATCAGGCGGTGGCCC
GGGCGCTGACGCGGGTGGGCATGAGTGAGCTGCGTCATCGCCAGATTGGCGAGCTCTCCGGCGGCCAGAAAAAGCGGGTG
TTCCTGGCCCGGGCCCTGGCCCAGGACAGCCAGGTCATTCTGCTCGACGAGCCCTTTACCGGGGTGGACGTAAACACCGA
GGATCGCATCATTACCTTGCTGCGGGAGCTGCGCGACGAGGGCCGGGTGATGCTGGTCTCCACCCACAACCTGGGCTCGG
TGCCCGAGTTTTGCGATCGCACCGTGCTGATTAAGGGCACCATACTGGCCCACGGCACCACCAAAGACACCTTCAATCAG
GCCAACCTGGAGCTGGCCTTTGGCGGCGTACTGCGCCATTTCATGCTCACCGGCCATACCCTGCCCATTGGCGTGATCAG
CGATGACGAGCGGCCGTTGATCATCGAGGGGGGGCGGGTGCAGAGCCGGGACAGCCAGAGCAAACGCAGGGAGGACGAGG
ATGGCGGCCCTGCTTGA

Protein sequence :
MSTIDTLAATPDGAGMVVQQVTVTYRNGHTALRDASFHLPLGTIAALVGVNGSGKSTLFKAIMGFVRLASGDIRVLGQPV
AAALRGNAVAYVPQSEEVDWHFPVRVEDVVMMGRYGHMGLLRRPKAADHQAVARALTRVGMSELRHRQIGELSGGQKKRV
FLARALAQDSQVILLDEPFTGVDVNTEDRIITLLRELRDEGRVMLVSTHNLGSVPEFCDRTVLIKGTILAHGTTKDTFNQ
ANLELAFGGVLRHFMLTGHTLPIGVISDDERPLIIEGGRVQSRDSQSKRREDEDGGPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-92 76
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-91 76
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-91 76
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 8e-92 76
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-92 76

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GU3_02030 YP_005090913.1 iron ABC transporter BAC0350 Protein 6e-92 76
GU3_02030 YP_005090913.1 iron ABC transporter BAC0440 Protein 2e-82 60
GU3_02030 YP_005090913.1 iron ABC transporter BAC0400 Protein 2e-49 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GU3_02030 YP_005090913.1 iron ABC transporter VFG0526 Protein 6e-92 76