Gene Information

Name : GU3_15035 (GU3_15035)
Accession : YP_005093510.1
Strain : Oceanimonas sp. GK1
Genome accession: NC_016745
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3279509 - 3280903 bp
Length : 1395 bp
Strand : -
Note : COG0305 Replicative DNA helicase

DNA sequence :
ATGACAGACAAGACCGCCAACCGGTCCGATCAGGCCGTGGCCCAGCTTAAAATGCCGCCCCATTCCTTTGAAGCGGAGCA
GTCCGTGTTGGGCGGCTTGTTGCTGGACAACAATGCCTGGGACCGGGTGGCGGAGAAGGTCTCGGACACCGACTTCTACA
GCCGGCCCCACCGGCTGGTGTTTCAGGCCATGCAGCGGCTCAGCCAGGCCGGCAGCCCCATTGACCTGATCACGGTGCAG
GAAGAGCTGGAGCGGCACGAGGCGCTGGAAACCGTGGGCGGCTTTTCCTATCTGGTGGAGGTGGCGAAGAACACCCCCAG
CGCAGCCAACATCGGCGCCTATGCGGATATCGTGCGGGAGCGGGCGGTGGTGCGCGAGATGATCGCCGTGGCCAACGAGA
TTGCCGAGGCCGGGTTCGATCCCCAGGGGCGCAGCTCCTCCGATCTGCTGGATCTGGCTGAAAGCCGGGTGTTCAAGATT
GCCGAGAGTCGCACCGGTGCCAACGAGGGACCGCAACCGCTGCGAAACCTGCTCGAAAAGACCATAGATCGCATAGAAGA
TTTATTTAAAAATCCGCATCAGGGCATTACCGGTGTCTCTACCGGATACAATGATCTAGATAAAAAAACTGCCGGACTGC
AACCTTCCGATCTGATTATAGTGGCGGCCAGACCCTCTATGGGTAAAACTACTTTTGCAATGAATCTTTGCGAGCACGCT
GCACTAACAAATGACAAACCTGTGCTCATATTCTCCTTGGAAATGCCATCTGAGCAAATTATTATGCGGATGCTTGCTTC
CCTGGGACGAATCGATCAAACCCGTATTCGCACCGGGCAACTGGATGATGAAGACTGGGGCAGGTTGTCTTCCACCATGG
GCATGTTGCTGGAGAAAGGTCAGCTCTATATCGACGACTCTTCCGGCCTGACTCCCACCGAAGTGCGTTCCCGGGCCCGG
CGAGTGGCCCGCGAGCACGGTGGTGTCAGCATGATCATGATCGACTACCTGCAACTGATGACGGTACCCAGCCTGGCCGA
TAACCGGACCCTGGAAATCGCCGAGATTTCCCGCTCGCTCAAGGCCCTGGCCAAGGAGCTGCAGGTGCCGGTGGTGGCGC
TGTCCCAGCTTAACCGAAGCCTGGAACAGCGCGCCGACAAACGGCCGGTTAACTCGGATCTGCGGGAGTCCGGCTCCATC
GAGCAGGACGCCGACCTCATCATGTTTATCTATCGGGACGAGGTCTATCACGAAGACAGCCCCGATAAAGGCATCGCTGA
AATCATCATCGGCAAGCAGCGTAACGGACCCATAGGCAAGGTGCGGCTGACGTTTCAGGGGCAGTTTTCCCGCTTCGACA
ACTACGCCGGACCGGATTTCGATGATGATTATTAA

Protein sequence :
MTDKTANRSDQAVAQLKMPPHSFEAEQSVLGGLLLDNNAWDRVAEKVSDTDFYSRPHRLVFQAMQRLSQAGSPIDLITVQ
EELERHEALETVGGFSYLVEVAKNTPSAANIGAYADIVRERAVVREMIAVANEIAEAGFDPQGRSSSDLLDLAESRVFKI
AESRTGANEGPQPLRNLLEKTIDRIEDLFKNPHQGITGVSTGYNDLDKKTAGLQPSDLIIVAARPSMGKTTFAMNLCEHA
ALTNDKPVLIFSLEMPSEQIIMRMLASLGRIDQTRIRTGQLDDEDWGRLSSTMGMLLEKGQLYIDDSSGLTPTEVRSRAR
RVAREHGGVSMIMIDYLQLMTVPSLADNRTLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNSDLRESGSI
EQDADLIMFIYRDEVYHEDSPDKGIAEIIIGKQRNGPIGKVRLTFQGQFSRFDNYAGPDFDDDY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 8e-103 53
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 5e-99 52
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 2e-99 52
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 7e-94 51
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 1e-97 50
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 8e-90 48
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 8e-90 48
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 9e-88 47
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 2e-78 46