Gene Information

Name : GU3_14830 (GU3_14830)
Accession : YP_005093469.1
Strain : Oceanimonas sp. GK1
Genome accession: NC_016745
Putative virulence/resistance : Virulence
Product : capsule export protein KpsC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3238042 - 3240033 bp
Length : 1992 bp
Strand : +
Note : COG3563 Capsule polysaccharide export protein

DNA sequence :
ATGCCTGGCAACAACGCCACTGCCGTGGTGGGCTGGGGCATGAAACCCAACACCGAGCGGGCCCGCCGGCTGGCAGCGAG
AAAAGACCTGCCCTTCTGGCAGTTGGAGGATGGCTTTGTGGGCTATATTGGCCACCCCGCCACAAGGGCCACCCGGCTGT
CGCTGATTGTGGACGAGGTGGGTGTGTATTACGACGCCACCCGCCCCAGCCGCCTGGAGCAGTTGCTGCAAAACATCGAC
TGGTGGAATGATGACTGGCAGCAGCGGGCCGATGCTCTGCGTCGCATTCTGGTTGACCAGGGCATTACCAAATACAACTG
CTACTCCGGCAATGTGTTGCCGGCAGCCATCGCGGCCAGGCTGGATAACACTCGCCCCCGGGTGCTGGTGATTGACCAGA
CTAAAGGCGATCAGTCGGTGCGGCTGGGGCTGGCAAGCGAGGCGTCGTTTACCAATATGCTGGCTGCCGCCAAGGCCGAG
AACCCGGACGCCCAGATTATTGTGCGCACCCACCCCGATGTGCTGTTGGGCAAAAAGCAGGGGTATTTAACCGATGTGGC
CGGTAGCGATGTGTTGCTACTGGCCGACAGCGTGAACCCCTTTGCGCTGATGGCCGAGATGGACAAAGTGTATACCGTTA
CTTCCCAGTTGGGCTTTGAAGCCCTGCTGGCCGGTAAGCCGGTGGTGTGTTTTGGCGCGCCCTTTTATGCGGGCTGGGGC
GTAACCGACGATCGCCTTGCCGTGCTGCGCCGGGGTGAACAACGCACGGTGCCACAACTGCTGGCGGCGGCCTATTTACG
TTATTGCCGTTATCTTGACCCGGTAACCGGTGAGCGTTGCGAACTGGAAGATCTGCTGGATTTGATCCTGGCGCAGCGCT
CACCGGTGCCGCCGGTGGATACCCTGTATGCGGTGGGCTTTTCGTTATGGCGCCGTCGCTTTGCGCCCCGTTTTTTGCGC
CGTTATGCAAAGAAAGTGATATTTGTTGACCGTATGCCGGACGCCATGGATTCCCGCCTGCGCGGGAATGACACTTCCCC
TTCCCGGGCCGTGCTGGTATGGGGCCGCAAATTTGAATCGCAACTGGCCGGTTGTTCACTACCGGTGTGGCGAATGGAAG
ACGGCTTTTTGCGATCTGTGGGGCTGGGTTCGGATCTGCGCCGCCCAGGCTCGCTGGTAATTGACCCCTTGGGCATGTAT
TACGATCCGCGCACCCCCAGTGCCATTGAGCATTATTTAAAACATCATGACTTTTCCGCTCTGGAGCTGGAGCTGGGTGA
GCAGCTGTTAACGCATTTTCGCGAGCAGGCACTGACCAAATACAATGTGGGTGTTCGCCGCCAACTGGATTGGCGGGCAC
AGGCCAGCCATCGTCCGGTCATTCTGGTGCCTGGCCAGGTAGATGACGATGCCTCGGTGCAACTGGGCAGCCCCTTTGTG
GCGGGCAATGCCGCCCTGCTGCAGGCGGTACGGGCAGCTCACCCCAATGCTTTTATCGTGTTTAAACCCCATCCGGATGT
AGTAAGTGGCAACCGCAAAGGACAGGTGCCGGAAAAGGTGCTGAAAGCTTGTGTAGACCTGGTGGAAACCGAGGCCGGCA
TTGTGGATTGTTTGGATGAGTGCGATGCGGTGCATACGCTAACGTCACTGACAGGGCTGGAAGCGTTAATTCGTGGTAAG
CCGGTCACGGTATGGGGCCAGCCGTTTTATGCCGGTTGGGGGCTGACCACAAATGTTCACCCGGTAACGCGCCGGGCTCG
AACTCTACCCTTGGCCGCGCTGGTGTATGCCACCTATGCCTGGTACCCCACCTATGTGGATTATGACTCCGGCCTGTGCA
GCACGCCGCTACGCATGGCGCGCCAGCTGGCTCAAGAGCGGAAAGCATACCGGGAGCCCAAACACCCTGCCCTGCAGTTG
GTTTATCGCCGTTGGCGCAAACTGAAGTATTTATGGGAAGCGTTGGTTCCAAATCGCACAGGTTGGCGATGA

Protein sequence :
MPGNNATAVVGWGMKPNTERARRLAARKDLPFWQLEDGFVGYIGHPATRATRLSLIVDEVGVYYDATRPSRLEQLLQNID
WWNDDWQQRADALRRILVDQGITKYNCYSGNVLPAAIAARLDNTRPRVLVIDQTKGDQSVRLGLASEASFTNMLAAAKAE
NPDAQIIVRTHPDVLLGKKQGYLTDVAGSDVLLLADSVNPFALMAEMDKVYTVTSQLGFEALLAGKPVVCFGAPFYAGWG
VTDDRLAVLRRGEQRTVPQLLAAAYLRYCRYLDPVTGERCELEDLLDLILAQRSPVPPVDTLYAVGFSLWRRRFAPRFLR
RYAKKVIFVDRMPDAMDSRLRGNDTSPSRAVLVWGRKFESQLAGCSLPVWRMEDGFLRSVGLGSDLRRPGSLVIDPLGMY
YDPRTPSAIEHYLKHHDFSALELELGEQLLTHFREQALTKYNVGVRRQLDWRAQASHRPVILVPGQVDDDASVQLGSPFV
AGNAALLQAVRAAHPNAFIVFKPHPDVVSGNRKGQVPEKVLKACVDLVETEAGIVDCLDECDAVHTLTSLTGLEALIRGK
PVTVWGQPFYAGWGLTTNVHPVTRRARTLPLAALVYATYAWYPTYVDYDSGLCSTPLRMARQLAQERKAYREPKHPALQL
VYRRWRKLKYLWEALVPNRTGWR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsC AAZ04470.1 capsule polysaccharide export protein Virulence PAI I APEC-O1 Protein 6e-97 44
kpsC YP_854335.1 capsule polysaccharide export protein KpsC Not tested PAI I APEC-O1 Protein 7e-97 44
lipA NP_273145.1 capsule polysaccharide modification protein Not tested IHT-A Protein 3e-106 44
kpsC CAE85217.1 KpsC protein Virulence PAI V 536 Protein 2e-113 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GU3_14830 YP_005093469.1 capsule export protein KpsC VFG0259 Protein 1e-106 44
GU3_14830 YP_005093469.1 capsule export protein KpsC VFG0704 Protein 2e-93 43
GU3_14830 YP_005093469.1 capsule export protein KpsC VFG0692 Protein 8e-103 43