Gene Information

Name : GU3_12800 (GU3_12800)
Accession : YP_005093065.1
Strain : Oceanimonas sp. GK1
Genome accession: NC_016745
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2789088 - 2789639 bp
Length : 552 bp
Strand : -
Note : COG2148 Sugar transferases involved in lipopolysaccharide synthesis

DNA sequence :
ATGATTCGGCTGTTTGATATTGTATTTTCGTTGCTGGGGCTGGTGTGTGGCTTTCCGGTGTTTGTGTTGCTTACCCTTAT
CGGCCTGTTTGATACCGGCTCACCTATTTTTCGCCAGGTTAGGGTGGGGCGGCACCAACAGCCGTTTACCCTGGTCAAGT
TTCGCACCATGAAGGTGGACACCGCTTCCGTGGCTTCTCACCTGGCAAGTGCATCTTCCATTACGCCTTTTGGCCATTTT
TTGCGTCGTACCAAACTGGATGAATTGCCTCAGCTGTGGAATGTGCTGAAAGGCGAAATGAGCCTGGTGGGGCCACGGCC
CGGCCTGTTTAATCAGGAAGAGCTGACGAGAGCCCGAGCTGCTCACGGTGTGTATGATGTGCGCCCCGGCATTACCGGCC
TGGCGCAGGTGAATGAAATTGACATGTCCACCCCCGAACTGCTGGCCGAGACAGATAAAAAAATGATCCAGTCGCTGTCG
GTTAAGGATTATTTTCGTTACATACTGCTTACCGTGTCCGGCAAGGGCAGTGGCGATCGGGTAAAAAGCTGA

Protein sequence :
MIRLFDIVFSLLGLVCGFPVFVLLTLIGLFDTGSPIFRQVRVGRHQQPFTLVKFRTMKVDTASVASHLASASSITPFGHF
LRRTKLDELPQLWNVLKGEMSLVGPRPGLFNQEELTRARAAHGVYDVRPGITGLAQVNEIDMSTPELLAETDKKMIQSLS
VKDYFRYILLTVSGKGSGDRVKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 1e-21 44
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 9e-21 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GU3_12800 YP_005093065.1 sugar transferase VFG1309 Protein 2e-23 51