Gene Information

Name : GU3_11085 (GU3_11085)
Accession : YP_005092723.1
Strain : Oceanimonas sp. GK1
Genome accession: NC_016745
Putative virulence/resistance : Virulence
Product : Fis family two component sigma54 specific transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2405830 - 2407143 bp
Length : 1314 bp
Strand : -
Note : COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains

DNA sequence :
ATGTTCTTGCAGGACGAGCCTCTGTCGCTGACCGTGGTCAGCAGTGGTCAGGAGGCGCTGGAGCATATTCGGCGCCAGCC
GCCCGATATTTTGTTGCTGGATCTGATCCTGCCCGACATGCCGGGCATGGATATTCTGCAATGGCTGCACCAGGAGCAGC
AGAATGTCACCACCATAGTGATGACCGCCCACGGCTCGGTGGACGTGGCGGTCGACGCCATGCGCCTGGGGGCTCATGAC
TTTATCAGCAAGCCGGTGGAAGCCGAACGGCTCAAGGTCACCCTGCACAACACCATGAAATTTCGCCACCTCAATCAGCT
GGTCGACCAGTACCGCCATGAAATGGAGCGGGAGCGCTTCCAGGGCTTTATCGGTGAAAGCCTGCCGATGCAAAAGGTCT
ACCGGCTGATTGAGAATGCCGCCCCCAGCACCGCCACCGTGTTCATCACCGGCGAAAGCGGCACCGGCAAGGAAGTGTGT
GCCGAAGCCATTCATCAGCTCAGCGGCCGGGCCGACGGCCCCTTTATCGCCCTGAACTGCGCCGCCATTCCCCGGGATCT
GATGGAAAGCGAGCTGTTTGGCCATATCAAGGGCGCCTTTACCGGGGCGCTGCAGGACAGGGACGGTGCGGTGATCCGCG
CCAATGGCGGCACCCTGTTTATGGACGAGATCTGCGAAATGGATCTGGAGCTGCAAAGCAAGCTGCTGCGTTTTCTCCAG
ACCGGGCTGATCCAGCCGGTGGGCAGCTCCAATCACGTCAAGGTGGACGTACGCATCGTGTGTGCCACCAACCGTGATCC
GCTGGTGGAAGTGGAGCAGGGTCGGTTTCGGGAAGATCTCTACTATCGCCTGCACGTGATCCCGGTACACCTGCCCCCGC
TCAGGGAGCGGGGTGGGGATGTGATCAGCATCGCCACCGCCCTGGTGCGTCAGGCATCCCGGGAAGAGGGCAAGGATTTT
GTGGGGTTGTCCGAGGCCACCAAGGACCGGCTGCAGGCCTATCATTGGCCGGGCAATGTGCGCCAGTTGCAGAATGTCAT
CCGTAACGCCGTGGTGCTGCACCGGGGCGAGTGGATTGAGGTCGATATGCTGCCCGCGCCCCTGGACCGGCCCCTGTTTG
AGGTGCCCGCCGCAGAGCGGGAGCTGGTGCCCAGCCCTCAGCCTATCTTGCCGCTGGCGGTCATCGAGCGCCAAGCCATC
GAGCGCACCATAGCGCACTGTGAGGGCAATATTTCCCGGGCGGCAGCGCTGCTCGAGGTGAGCCCGTCCACCATTTACCG
CAAGCTGCAAAGCTGGGGAGGCGATCATGGCTGA

Protein sequence :
MFLQDEPLSLTVVSSGQEALEHIRRQPPDILLLDLILPDMPGMDILQWLHQEQQNVTTIVMTAHGSVDVAVDAMRLGAHD
FISKPVEAERLKVTLHNTMKFRHLNQLVDQYRHEMERERFQGFIGESLPMQKVYRLIENAAPSTATVFITGESGTGKEVC
AEAIHQLSGRADGPFIALNCAAIPRDLMESELFGHIKGAFTGALQDRDGAVIRANGGTLFMDEICEMDLELQSKLLRFLQ
TGLIQPVGSSNHVKVDVRIVCATNRDPLVEVEQGRFREDLYYRLHVIPVHLPPLRERGGDVISIATALVRQASREEGKDF
VGLSEATKDRLQAYHWPGNVRQLQNVIRNAVVLHRGEWIEVDMLPAPLDRPLFEVPAAERELVPSPQPILPLAVIERQAI
ERTIAHCEGNISRAAALLEVSPSTIYRKLQSWGGDHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 2e-60 43
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 2e-60 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GU3_11085 YP_005092723.1 Fis family two component sigma54 specific transcriptional regulator VFG1249 Protein 3e-54 42
GU3_11085 YP_005092723.1 Fis family two component sigma54 specific transcriptional regulator VFG1214 Protein 1e-59 42