Gene Information

Name : GU3_06330 (GU3_06330)
Accession : YP_005091772.1
Strain : Oceanimonas sp. GK1
Genome accession: NC_016745
Putative virulence/resistance : Virulence
Product : cobalamin/Fe3+-siderophores ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1368766 - 1369533 bp
Length : 768 bp
Strand : -
Note : COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

DNA sequence : 
ATGCTGGAACTGCGTCAGATCCGCGTACATCGTGACCACAGAACCATACTGAGCCTGGACCGGCTGTCCCTGGCGCAGCA
TGACTTCACCGTTATTCTCGGCCACAACGGCTCGGGCAAGTCTACCCTGATGAAACTGCTGGCCCGGCAGATGCCGCCCG
ATGAGGGAACACTGCGCCTAGACGGTCAGCCACTGGGTCATTACTCACAGCGGGAGTTTGCCCGTCGCATCGCCTTCTTG
CCCCAGCGCCTGCCCGAGGTGGCCGGACTCAACGTGCGCGAACTGGTGCGGCTGGGCCGGTTCCCCTGGCGTGGCATGCT
GGGACGCTGGCAAGCGCAGGACCACGCCCTGGTGGAGGAAGCCATGGCCCACACGCGGGTCGGCCACTATGCCGATCATC
AGGCCGACCTGCTGTCGGGGGGCGAACGCCAGCGGGCCTGGGTCGCCATGCTGCTGGCCCAGCAATCTCCCCTGCTGTTG
CTGGACGAACCGACCTCGGCCCTGGATCTGAGCCATCAGCACGATCTGCTGCTGCTGCTGAAACGGCTCAACCGGGAGCA
GCAACGAGGGGTCATCGTGATCCTGCACGATCTCAACCTGGCATTGCGTTTTGCCGATCGCATCATCGCCCTCAAGCAGG
GCCGGCTGTTGTTCGACAAGGCGCCCGCCGAGCTGATGTCGGAGCAGTTGCTGTCCGAGCTGTACGACATTCCCATTCGC
CTGCTTGACCACCCCGAGCAGAATGAAAAAATTGCCATTGTTGCCTGA

Protein sequence : 
MLELRQIRVHRDHRTILSLDRLSLAQHDFTVILGHNGSGKSTLMKLLARQMPPDEGTLRLDGQPLGHYSQREFARRIAFL
PQRLPEVAGLNVRELVRLGRFPWRGMLGRWQAQDHALVEEAMAHTRVGHYADHQADLLSGGERQRAWVAMLLAQQSPLLL
LDEPTSALDLSHQHDLLLLLKRLNREQQRGVIVILHDLNLALRFADRIIALKQGRLLFDKAPAELMSEQLLSELYDIPIR
LLDHPEQNEKIAIVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 8e-27 42
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-30 42
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-30 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-30 42
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GU3_06330 YP_005091772.1 cobalamin/Fe3+-siderophores ABC transporter ATPase BAC0164 Protein 5e-27 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GU3_06330 YP_005091772.1 cobalamin/Fe3+-siderophores ABC transporter ATPase VFG0925 Protein 5e-35 43
GU3_06330 YP_005091772.1 cobalamin/Fe3+-siderophores ABC transporter ATPase VFG1042 Protein 4e-27 42