Gene Information

Name : GU3_05755 (GU3_05755)
Accession : YP_005091657.1
Strain : Oceanimonas sp. GK1
Genome accession: NC_016745
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1243635 - 1244750 bp
Length : 1116 bp
Strand : +
Note : COG0117 Pyrimidine deaminase

DNA sequence :
GTGTTCACAAAAGACGATGCGCGCTGGATGGCCAGGGCGCTTGAGCTGGCCCGTCGCGGCCGTTTTACCACCAGCCCCAA
TCCGGCGGTGGGCTGTGTGGTGGTTAAGGATGGCAACCTGGTGGGCGAGGGCTTTCACCAGCGCGCCGGCGGCCCTCACG
CCGAGGTGTTTGCCCTGCGCGAAGCCGGCGCCGCCGCTCAGGGCGCCACCGCCTACGTGACCCTGGAGCCCTGCTCTCAC
CATGGCCGTACGCCGCCCTGCGCCCAGGGGCTGATTGACGCCGGCGTGACCCGGGTGGTGGCCGCCATGGTGGATCCCAA
CCCCCGGGTGGCGGGCCGCGGCCTGGCCATGCTGCGTGAGGCAGGCATTCAGGCCGAGGCCGGACTGATGAGCGAGGCGG
CGGAGGCGGTGAATGTGGGGTTTCTGCACCGCATGCGTACCGGCCGGCCCTTTGTGACGCTCAAGCTGGCCGCCAGCCTG
GATGGCCGTACCGCGCTGGCCAACGGCGAAAGCCAGTGGATCACCGGCCCCGCCGCCCGGCGCGACGTACAGCGCCATCG
GGCGCAAAGCTGCGCCCTGCTCTCCGGCGCCGACACCGTGCTGATGGACAACGCCGCCCTCAATGTACGCTGGGCCGAGC
TGCCCGCCTCGCTGCGCCATGCCTATGCCGAGCAGGAACTGCGCCAGCCCCTGCGCATTGTGATCGACACCCAAAACCGG
CTGCACTCAGGGCTGCGGCTGTTTGCGCAGCCCGGCCCCATTTTATTGCTGCGCGGCCAGGTTACCGGCGGCTTTGGCGA
CGAGGTGGAAGAGTGCGTATTGCCGCTAACCTCTCATGGCAAGCTGGATCTGGCCCTGCTGCTGGATGAGCTGGGCCGGC
GTCAGCTCAATCACCTCTGGGTAGAGGCGGGGGCCACCCTGGGGGGCGCCCTGGTTGCGGCCGGACTTATCAACGAGCTG
GTGCTCTATCAGGCCCCCATGCTGATGGGCAACCCGGCCCGGGGCCTGCTGGCGCTGCCGGAATTTACCGCCATGAGTCA
GCCGCCCCGGCTGGCCTGGCAGGACTGCCGCTTTGTGGGCGGCGATCTCAAACTGATTGCAAGGGTAACCGACTGA

Protein sequence :
MFTKDDARWMARALELARRGRFTTSPNPAVGCVVVKDGNLVGEGFHQRAGGPHAEVFALREAGAAAQGATAYVTLEPCSH
HGRTPPCAQGLIDAGVTRVVAAMVDPNPRVAGRGLAMLREAGIQAEAGLMSEAAEAVNVGFLHRMRTGRPFVTLKLAASL
DGRTALANGESQWITGPAARRDVQRHRAQSCALLSGADTVLMDNAALNVRWAELPASLRHAYAEQELRQPLRIVIDTQNR
LHSGLRLFAQPGPILLLRGQVTGGFGDEVEECVLPLTSHGKLDLALLLDELGRRQLNHLWVEAGATLGGALVAAGLINEL
VLYQAPMLMGNPARGLLALPEFTAMSQPPRLAWQDCRFVGGDLKLIARVTD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 3e-57 47
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 3e-57 47