Gene Information

Name : kpsT (PSE_p0222)
Accession : YP_005086771.1
Strain :
Genome accession: NC_016646
Putative virulence/resistance : Virulence
Product : Polysialic acid transport ATP-binding protein KpsT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 250570 - 251118 bp
Length : 549 bp
Strand : +
Note : -

DNA sequence : 
TTGGGCCATAATGGTGCAGGTAAGTCTACTTTGATGCGTCTCATCGCAGGAGCAGAGCTTCCTGACAGCGGCAAAATTAA
ACGAAATGTAAAAGTATCTTGGCCGCTGGGTTTTGGCGGTGGTTTTGCTGGCAAGATGACTGGTATTGAAAATGTACGTT
TTGTTGCTCGCATGTATGGCGAGGACACAGAACGGATGGTTGAATTTGTTGAAGACTTTTCTGAACTTGGGCCGTCAATG
GCACTACCCATCCAAACATACTCTAGTGGGATGAAAGCTCGTCTTGCATTTGGTGTTAGTATGGCTATTAATTTCAGATG
CTATTTGATAGATGAAGTAACCGCCGTTGGCGATAGGCGTTTTAAGCGGAAGTGTGATGAAGTTTTCGAAACTAAACTCA
AACACGCAAATATAATCATGATTTCACATTCAGAACGAACAATAAAAAAGCTCTGCGATAGTGCTTGCCTCTTACATAAT
GGCGAATTGACTATGTTTGACTCAGTAGAAGAAGCACTGGCACAACATCGTAAGAATCAACTTAAGTAG

Protein sequence : 
MGHNGAGKSTLMRLIAGAELPDSGKIKRNVKVSWPLGFGGGFAGKMTGIENVRFVARMYGEDTERMVEFVEDFSELGPSM
ALPIQTYSSGMKARLAFGVSMAINFRCYLIDEVTAVGDRRFKRKCDEVFETKLKHANIIMISHSERTIKKLCDSACLLHN
GELTMFDSVEEALAQHRKNQLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 1e-42 53
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 5e-39 52
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 2e-37 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kpsT YP_005086771.1 Polysialic acid transport ATP-binding protein KpsT VFG1449 Protein 3e-43 53
kpsT YP_005086771.1 Polysialic acid transport ATP-binding protein KpsT VFG0258 Protein 1e-39 52
kpsT YP_005086771.1 Polysialic acid transport ATP-binding protein KpsT VFG2563 Protein 4e-38 50
kpsT YP_005086771.1 Polysialic acid transport ATP-binding protein KpsT VFG0696 Protein 9e-39 49