|
Name : PSE_5025 (PSE_5025) Accession : YP_005083549.1 Strain : Pseudovibrio sp. FO-BEG1 Genome accession: NC_016642 Putative virulence/resistance : Unknown Product : RNA binding S1 domain-containing protein Function : - COG functional category : - COG ID : - EC number : - Position : 5412147 - 5414603 bp Length : 2457 bp Strand : - Note : - DNA sequence : ATGTCTGATCTGAGCTCTGTTGCTTCCTCTTCCTCTCCTGCCAAAGCTGGTGCATTGCCTGCGGATGTTGCTTTGCGGAT TTCTCAGCGGATTGCTGGTGAAATTGGCTGTGCGCCGGGGCAGGTGAATTCTGCGGTGCAGTTGTTGGATGAAGGCTCTA CGGTTCCGTTTATTGCACGTTACCGTAAAGAAGCGACGGGCGGGTTGGATGATAGCCAGCTGCGTACGTTGGAAGAGCGC CTGATTTACATGCGTGAGATGGAAGATCGCCGCAAAGCGATTGTGAAATCCATTGATGAGCAGGGCAAGCTCACCGACGA GCTGGCAAAGCAGATTGCGTCGGCGGATAACAAAGCTGCGCTAGAAGATCTCTATTTGCCTTACAAAAAGAAGCGCCGCA CCAAAGCGCAGATTGCGCGCGAAGCTGGCATTGAGCCGCTGGCTGATCTGCTGCTGGGTGATCCGAGCAAGATGCCTGAG AGTGAAGCGGGTAGTTTTGTTGATGCGGAGAAGGGCTTTGCGGACACAAAGGCCGTGCTGGATGGGGCACGTCAGATCCT CATGGAGCGGTTTTCCGAGAACGCTCAGCTGGTTGGTAAGCTGCGTAACTATGTGGCGCGTCAAGGTGCTGTGAAGGCGG AAGTTGTTGCGGGCAAAGAGCAGGAAGGCGCGAAGTTCTCTGATTACTTCGGCTACTCCGAGAATTGGAAGAACATTCCA AGTCACCGTGCACTGGCGCTGTTGCGTGGTCGTAACGAAGGCATTCTGGCGCTGGACCTGAAGGTGGATGAGGATGATGT TTCCGCTGTGAAGCCGGTTGAGCAGATGATTGCGGATGCTGCGGGTATCGAAAATAAGGGCCGCCCTGCTGACAAGTGGC TTTCTGATGTGTGTCGCTGGACGTGGAAGGTGAAGATTGGCCTTCATGTTGAGCTGGACCTGATGAGTGAGCTGCGCGAC AAGGCGGAAGAAGAAGCGATCAAGGTTTTTGCTCGCAACTTGAAAGACTTGCTGTTGGCAGCTCCTGCTGGTCCGCGTGC GACGCTGGGGCTTGATCCGGGTATTCGTACCGGTGTGAAGGTGGCTGTTGTTGATGCTACGGGCAAGCTGGTAGATACGG CGACCATCTACCCATTCCAGCCACGCAATGACATTCGGGGCTCATTAGCAACGCTGCGGATGCTGGTTGCCAAGCATGGC GTGAGCCTGATTGCGATTGGTAATGGTACTGCGAGCCGTGAGACGGATAAATTGGCTGCAGACTTGCTGAAGGACATTCC TGCCGAGCATCGCCCAACCAAGGTGATGGTGAACGAGGCAGGTGCTTCTGTTTACTCAGCCTCTGCGTTGGCAGCGAAAG AGATGCCGGATGTTGATGTGTCGCTTCGCGGTGCGGCTTCGATCGGTCGTCGTTTGCAAGATCCGCTGGCGGAGCTGGTG AAAATTGAGCCGAAATCCATTGGTGTTGGGCAATATCAGCATGATGTGAACCAGACCAAGCTGGCACGTTCTCTGGACGG TGTTGTTGAGGATGCGGTGAACGCGGTTGGGGTTGATCTCAACACAGCGTCGGCTCCGCTGCTGGCACATATCTCCGGCC TGACTGATAGCCTTGCCAAGGCGGTGGTTGAGTATCGTGACACAGTTGGTGCGTTCAAAAACCGCAAAGAACTGCTGAAG GTGGCTCGTCTTGGGCCGAAAGCGTTTGAGCAGTGTGCGGGCTTCCTGCGGATTGCAGATGGCGATAACCCGCTGGACGC GTCTTCTGTTCACCCGGAAGCTTATCCGGTGGCGCAGAAGATCATCAAAGCGTGTGGTCGGGACATTCGCGAGATCATGG GTTCCAACCTGCTGAGCAATCTGGATCCGAAAGAGTTTACGGATGAGAAGTTCGGCTTGCCGACTGTGAAGGACATCTTC TCAGAGCTGGAAAAGCCGGGCCGTGATCCGCGCCCTGAGTTCAAGACCGCCTCTTTCCAGGATGGTGTTGAGACCATGCA GGATCTGAAGCCGGGTATGATGCTGGAAGGCACTGTCACCAACGTAACCAACTTTGGCGCTTTCGTTGATATCGGTGTGC ATCAGGATGGTCTGGTGCATGTGTCTCAGCTGGCTGACCGGTTCGTGGATGATCCGCATACGGTGGTGAAGGCTGGCGAC ATCGTGAAGGTGCGTGTTGTTGAGGTGGACATTGCCCGCAAACGTATCGGTCTGACCTTGCGCAAAGACAGCGCGGATGC TCGCGAAAATGCACGGGAGCGTCAGGCTGAGCGTGGCGGTGGACGCAATCACGGTGGTGGTCGTCCGGGTGGCGGCAATC GCCCGAATGGTGGCAACCGTGGTGGTGGGCCTCGCGGTGGTGGCCGTGGAGGTAATAAGCCAGCGGATAATGGTGGTGGT GGCAACAACGCCATGGCTGCTGCACTGGCTGCGGCGTTCAATAAGCCGAAGCGCTAA Protein sequence : MSDLSSVASSSSPAKAGALPADVALRISQRIAGEIGCAPGQVNSAVQLLDEGSTVPFIARYRKEATGGLDDSQLRTLEER LIYMREMEDRRKAIVKSIDEQGKLTDELAKQIASADNKAALEDLYLPYKKKRRTKAQIAREAGIEPLADLLLGDPSKMPE SEAGSFVDAEKGFADTKAVLDGARQILMERFSENAQLVGKLRNYVARQGAVKAEVVAGKEQEGAKFSDYFGYSENWKNIP SHRALALLRGRNEGILALDLKVDEDDVSAVKPVEQMIADAAGIENKGRPADKWLSDVCRWTWKVKIGLHVELDLMSELRD KAEEEAIKVFARNLKDLLLAAPAGPRATLGLDPGIRTGVKVAVVDATGKLVDTATIYPFQPRNDIRGSLATLRMLVAKHG VSLIAIGNGTASRETDKLAADLLKDIPAEHRPTKVMVNEAGASVYSASALAAKEMPDVDVSLRGAASIGRRLQDPLAELV KIEPKSIGVGQYQHDVNQTKLARSLDGVVEDAVNAVGVDLNTASAPLLAHISGLTDSLAKAVVEYRDTVGAFKNRKELLK VARLGPKAFEQCAGFLRIADGDNPLDASSVHPEAYPVAQKIIKACGRDIREIMGSNLLSNLDPKEFTDEKFGLPTVKDIF SELEKPGRDPRPEFKTASFQDGVETMQDLKPGMMLEGTVTNVTNFGAFVDIGVHQDGLVHVSQLADRFVDDPHTVVKAGD IVKVRVVEVDIARKRIGLTLRKDSADARENARERQAERGGGRNHGGGRPGGGNRPNGGNRGGGPRGGGRGGNKPADNGGG GNNAMAAALAAAFNKPKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 61 |
