Gene Information

Name : PSE_4776 (PSE_4776)
Accession : YP_005083300.1
Strain : Pseudovibrio sp. FO-BEG1
Genome accession: NC_016642
Putative virulence/resistance : Resistance
Product : transferase hexapeptide repeat containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5148038 - 5148661 bp
Length : 624 bp
Strand : -
Note : -

DNA sequence : 
GTGCCAAATTATTTTGAGAGCCCGTTTAAGGGTATTCCGCTTCGGGAACAGGTGACCAATCCCAACATCATCGTTGGAAA
GCATTCTTATTATTCCGGTTTTTATCACGGCCACAGTTTTGATGAGTGTGCCCGATATCTGAGCGCTGAGGAAGATGAGC
AAGACAAGCTCGTCATCGGATCATATTGCTCGATTGGGTCTGGCGCTGTGTTCATGATGACTGGGAACCAAGGCCATCGG
GCAGAGTGGGCTTCGACATTCCCGTTCCATTATTTTGATGAGCCTGCGTTTGAAGGGGCGTCGGATGGCTTTAAGCCTTC
AGGCTCAACGCGCATCGGCAATGATGTCTGGATAGGATCTGAGGCGATGATCATGCCGGGTGTGCAGATCGGAAATGGGG
CCTTGATTGGCAGCCGTGCAGTGGTGACGAAGGATGTTCCTGCTTATGCGGTTGTTGCAGACAATCCAGCCAAGGTTATC
CGTTCCCGCTTTTCAGAGGAGCAGGTGCAGATGCTTCAAGAGATGAAGTGGTGGGATTGGAATGATGATACTTTGAAAGG
GGCTATGCCGCTGTTGTGCTCTTCAGACATCGAGCGGCTTTACGACTATTGGCTTGGCTTTTAA

Protein sequence : 
MPNYFESPFKGIPLREQVTNPNIIVGKHSYYSGFYHGHSFDECARYLSAEEDEQDKLVIGSYCSIGSGAVFMMTGNQGHR
AEWASTFPFHYFDEPAFEGASDGFKPSGSTRIGNDVWIGSEAMIMPGVQIGNGALIGSRAVVTKDVPAYAVVADNPAKVI
RSRFSEEQVQMLQEMKWWDWNDDTLKGAMPLLCSSDIERLYDYWLGF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 1e-58 66
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 3e-60 64
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 3e-60 64

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSE_4776 YP_005083300.1 transferase hexapeptide repeat containing protein AY123251.gene2.p01 Protein 4e-59 66
PSE_4776 YP_005083300.1 transferase hexapeptide repeat containing protein NC_002516.2.878374.p Protein 2e-60 66
PSE_4776 YP_005083300.1 transferase hexapeptide repeat containing protein AF322577.2.gene4.p01 Protein 2e-60 64
PSE_4776 YP_005083300.1 transferase hexapeptide repeat containing protein AY740681.1.gene5.p01 Protein 2e-60 64
PSE_4776 YP_005083300.1 transferase hexapeptide repeat containing protein JF268688.1.gene6.p01 Protein 3e-58 64
PSE_4776 YP_005083300.1 transferase hexapeptide repeat containing protein CP001581.1.gene990.p Protein 8e-45 46
PSE_4776 YP_005083300.1 transferase hexapeptide repeat containing protein NC_010410.6000796.p0 Protein 3e-28 42
PSE_4776 YP_005083300.1 transferase hexapeptide repeat containing protein NC_011595.7057349.p0 Protein 3e-28 42
PSE_4776 YP_005083300.1 transferase hexapeptide repeat containing protein NC_011586.7045146.p0 Protein 2e-28 42