Gene Information

Name : PSE_4077 (PSE_4077)
Accession : YP_005082603.1
Strain : Pseudovibrio sp. FO-BEG1
Genome accession: NC_016642
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliQ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4417086 - 4417352 bp
Length : 267 bp
Strand : -
Note : -

DNA sequence : 
ATGACCGGAGCAGAAGTGCTGGATATTGCCAGCGAAGGCATATGGACACTTATTCTGGTGTCGGCTCCCGTTATGCTTAT
CGGGCTTCTGGTTGGTGTGATTGTGGCGCTGTTTCAGGCACTGACACAAATTCAGGAACAAACGCTGGTGTTTGTCCCGA
AGATCCTGAGCATCTTTATTGCGTTGCTTGTGACACTTCCCTTCATGGGGGAGTTGATGAATTCTTTTACAAACCGCATT
GCCGGGTTGATTATCTCCGGATATTGA

Protein sequence : 
MTGAEVLDIASEGIWTLILVSAPVMLIGLLVGVIVALFQALTQIQEQTLVFVPKILSIFIALLVTLPFMGELMNSFTNRI
AGLIISGY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscS AAO18039.1 LscS Virulence TTSS locus Protein 2e-07 43
ssaS CAA68200.1 secretion system apparatus, SsaS Virulence SPI-2 Protein 2e-06 42
ssaS NP_456108.1 putative type III secretion protein Virulence SPI-2 Protein 4e-06 42
ssaS NP_805091.1 type III secretion protein Virulence SPI-2 Protein 4e-06 42
ssaS YP_216428.1 secretion system apparatus protein SsaS Virulence SPI-2 Protein 3e-06 42
ssaS NP_460385.1 type III secretion system apparatus protein Virulence SPI-2 Protein 3e-06 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSE_4077 YP_005082603.1 flagellar biosynthesis protein FliQ VFG0520 Protein 9e-07 42