Gene Information

Name : PSE_0041 (PSE_0041)
Accession : YP_005078575.1
Strain : Pseudovibrio sp. FO-BEG1
Genome accession: NC_016642
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein ybbA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 43493 - 44200 bp
Length : 708 bp
Strand : +
Note : -

DNA sequence : 
ATGACAGGTAATCCGGCACTAGACTTAAACGGCGTTCATCTTAGCCTGGGCCACGGCGCAGGCCGCACCCATATTCTTAA
AGGCATTGATCTTTCTATCAACACCGGCGAAAGCGTTGGCCTCGTCGGCCCATCCGGCTCAGGCAAATCTACCCTGCTTA
TGGTGATGGCAGGCCTCGAGCGTGCTGACAAAGGCACCGTAAAGGCCGCCGGACAAGAACTTGGCACCATGAGCGAGGAC
GAGCTCGCCCGCTTCCGCGGCCAGAACGTTGGCATCATCTTCCAGTCCTTCCACCTGGTCCCGAACATGACCGCTCTGGA
AAATGTTGCTGTTCCGCTTGAGCTTTCTGGCGACCCCAAAGCCTTTGAGCGTGCGAAAGAAGAGCTGGAAGCTGTTGGCC
TTGGCCACCGCCTCAACCACTACCCAACCCAGCTTTCCGGTGGAGAACAGCAGCGCGTCGCCGTTGCCCGCGCCCTTGTT
ACCAACCCGGAAATCCTCATCGCCGATGAACCAACTGGCAACCTGGACGAAACAACGGGTGAACAGATCATCGAGCTGAT
GTTCAACGCGCAGGAACGCAAGAACACCACATTGGTCCTAGTCACCCACGATCCATCACTGGCAGACCGCTGCCAACGTA
AGATCCGCGTACATTCCGGCACCATCGATGAAGAAACACCAGCCGTGCGAGAGGTGCGTGCGCGATGA

Protein sequence : 
MTGNPALDLNGVHLSLGHGAGRTHILKGIDLSINTGESVGLVGPSGSGKSTLLMVMAGLERADKGTVKAAGQELGTMSED
ELARFRGQNVGIIFQSFHLVPNMTALENVAVPLELSGDPKAFERAKEELEAVGLGHRLNHYPTQLSGGEQQRVAVARALV
TNPEILIADEPTGNLDETTGEQIIELMFNAQERKNTTLVLVTHDPSLADRCQRKIRVHSGTIDEETPAVREVRAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-34 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-28 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSE_0041 YP_005078575.1 putative ABC transporter ATP-binding protein ybbA NC_008702.1.4606598. Protein 5e-38 44
PSE_0041 YP_005078575.1 putative ABC transporter ATP-binding protein ybbA CP001581.1.gene598.p Protein 8e-39 43
PSE_0041 YP_005078575.1 putative ABC transporter ATP-binding protein ybbA NC_012469.1.7686878. Protein 3e-39 41