Gene Information

Name : yscJ (PSE_3690)
Accession : YP_005082216.1
Strain : Pseudovibrio sp. FO-BEG1
Genome accession: NC_016642
Putative virulence/resistance : Virulence
Product : Yop proteins translocation J
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4009965 - 4010735 bp
Length : 771 bp
Strand : -
Note : -

DNA sequence : 
ATGGTGATTGGTTTGGCCGCCTGCAACACGGATCTATACACCAACCTGTCCGAACAGGAAGCAAACACCATGCTGAGCCT
GCTTTTGGAAAATGGTGTGTCTGCTCAGAAAGTTGGTCTGGGTGACGGGCTCGTGACCCTGCAGGTGGATGACGACGATA
TTCAGCGTGCGGTCACAATTCTGAATGCAAACGGGCTGCCGAAGCGTGCGCGTGATACGCTGGGTCAGGTCTTCCAGAAG
TCTGGCATTATTTCCTCCCCATTTGAGGAGCGCATTCGCTTTATCTATGCGCTGAGTGAGGAAGTTTCCGAGACTATCAC
CGAGATCGACGGTATCGTTTCTGCGCGCGTTCACATCGTTTTGCCGGAAAAGGCAGATCTGGGTGAAGAGGTGAAGCCAT
CTTCTGCTGCGATATTCATCAAGCATCGTCCTGAATTTGATATCGAATTTCTGATCCCGCAGATCAAGCGTCTGGTCAGC
AACGCGATTGAGGGCGTTGAGTACGCCAGTGTCTCGGTTGCGCTTGTACCAGCTCGTGAGTTGAAGCCTGTTTCTCAGCG
TACTGCACAAGAATACGAAGCTGTGCTTCCTGGATTGCGCATCGCCCGTGATGATGCCGGTGTCTTCTGGCAGATCCTTG
GCGGCGTTGGTGTTGTGTTGCTGCTGTTGATTGGTGGCGTTGGCTTCCTGCTGTTCAAACAGTTCAGCTCTGGCAGTAAA
AAAGCCAAGGGTGGAGAAGACGACGAGCTTCTGCCTGAAGAACTTGCTTAG

Protein sequence : 
MVIGLAACNTDLYTNLSEQEANTMLSLLLENGVSAQKVGLGDGLVTLQVDDDDIQRAVTILNANGLPKRARDTLGQVFQK
SGIISSPFEERIRFIYALSEEVSETITEIDGIVSARVHIVLPEKADLGEEVKPSSAAIFIKHRPEFDIEFLIPQIKRLVS
NAIEGVEYASVSVALVPARELKPVSQRTAQEYEAVLPGLRIARDDAGVFWQILGGVGVVLLLLIGGVGFLLFKQFSSGSK
KAKGGEDDELLPEELA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscJ AAO18027.1 LscJ Virulence TTSS locus Protein 2e-38 45
hrcJ AAC35801.1 putative hrp type III secretion pathway protein Virulence Hrp PAI Protein 2e-34 43
hrcJ AAB05080.1 HrcJ Virulence Hrp PAI Protein 2e-35 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yscJ YP_005082216.1 Yop proteins translocation J VFG0218 Protein 9e-39 46
yscJ YP_005082216.1 Yop proteins translocation J VFG0409 Protein 6e-36 44