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Name : yscS (PSE_3682) Accession : YP_005082208.1 Strain : Pseudovibrio sp. FO-BEG1 Genome accession: NC_016642 Putative virulence/resistance : Virulence Product : Yop proteins translocation protein S Function : - COG functional category : - COG ID : - EC number : - Position : 4003940 - 4004209 bp Length : 270 bp Strand : - Note : - DNA sequence : ATGTCACCAGAAGACGCCGTCTACCGCATTTCCGAGGCCATGATCCTTGTGATGATGCTTTCTTTACCGCCGATCATCGT GGCTTCGCTGGTTGGTCTTGCGGTGTCCTTGCTGCAGGCTCTGACGCAGATGCAGGAGCAGACGATCCAGTTTGGTGTGA AGCTGATTGCCGTGGCGCTGACGCTGTTCATGATGTCCAGCTTCCTTGGATCGGAGACCATCGGTTTCACGCAGGCGTTG TTTGACGATTTCCCGACACTGGTCAGGTAA Protein sequence : MSPEDAVYRISEAMILVMMLSLPPIIVASLVGLAVSLLQALTQMQEQTIQFGVKLIAVALTLFMMSSFLGSETIGFTQAL FDDFPTLVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcS | ABQ88360.1 | HrcS | Virulence | Hrp PAI | Protein | 6e-05 | 52 |
| hrpO | AAB05076.1 | HrpO | Virulence | Hrp PAI | Protein | 6e-05 | 52 |
| hrcS | AAT96147.1 | HrcS | Virulence | T-PAI | Protein | 2e-05 | 52 |
| hrcS | AAT96201.1 | HrcS | Virulence | T-PAI | Protein | 2e-05 | 52 |
| lscS | AAO18039.1 | LscS | Virulence | TTSS locus | Protein | 1e-07 | 50 |
| hrcS | AAG33885.1 | HrcS | Virulence | Hrp PAI | Protein | 4e-05 | 50 |
| hrcS | NP_791221.1 | type III secretion protein HrcS | Virulence | Hrp PAI | Protein | 6e-05 | 50 |
| hrcS | AAB06006.1 | HrcS | Virulence | Hrp PAI | Protein | 1e-05 | 44 |
| spaQ | AAS66866.1 | SpaQ | Not tested | SSR-2 | Protein | 5e-06 | 43 |
| spaQ | YP_217808.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 9e-06 | 43 |
| spaQ | NP_457283.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 9e-06 | 43 |
| spaQ | NP_806492.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 9e-06 | 43 |
| spaQ | NP_461810.1 | needle complex export protein | Virulence | SPI-1 | Protein | 9e-06 | 43 |
| ECs3724 | NP_311751.1 | EpaQ | Not tested | LIM | Protein | 4e-05 | 41 |
| epaQ | AAZ31292.1 | EpaQ | Virulence | ETT2 | Protein | 5e-05 | 41 |
| escS | YP_003236102.1 | T3SS structure protein EscS | Virulence | LEE | Protein | 0.004 | 41 |
| escS | AAC38370.1 | EscS | Virulence | LEE | Protein | 0.003 | 41 |
| escS | NP_290282.1 | hypothetical protein | Virulence | LEE | Protein | 0.004 | 41 |
| ECs4582 | NP_312609.1 | EscS | Virulence | LEE | Protein | 0.004 | 41 |
| escS | AAC31527.1 | L0048 | Virulence | LEE | Protein | 0.003 | 41 |
| escS | ACU09472.1 | hypothetical protein | Not tested | LEE | Protein | 0.003 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yscS | YP_005082208.1 | Yop proteins translocation protein S | VFG0395 | Protein | 3e-08 | 53 |
| yscS | YP_005082208.1 | Yop proteins translocation protein S | VFG0043 | Protein | 2e-07 | 51 |
| yscS | YP_005082208.1 | Yop proteins translocation protein S | VFG0187 | Protein | 0.31 | 49 |
| yscS | YP_005082208.1 | Yop proteins translocation protein S | VFG0550 | Protein | 3e-06 | 43 |
| yscS | YP_005082208.1 | Yop proteins translocation protein S | VFG2132 | Protein | 5e-05 | 43 |
| yscS | YP_005082208.1 | Yop proteins translocation protein S | VFG1772 | Protein | 2e-07 | 41 |
| yscS | YP_005082208.1 | Yop proteins translocation protein S | VFG0716 | Protein | 0.001 | 41 |
| yscS | YP_005082208.1 | Yop proteins translocation protein S | VFG0826 | Protein | 0.001 | 41 |
