Gene Information

Name : lolD (PSE_3323)
Accession : YP_005081853.1
Strain : Pseudovibrio sp. FO-BEG1
Genome accession: NC_016642
Putative virulence/resistance : Resistance
Product : lipoprotein-releasing system ATP-binding protein LolD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3574046 - 3574741 bp
Length : 696 bp
Strand : -
Note : -

DNA sequence : 
ATGACGAAGACAAATATTCGAATTCAAAACCTGTCCAAACACTTTGAGCAGGGCCAGGTTGAGACCCACATTTTCCAGGA
TCTCGATCTGAGTATCAAAGAAGGTGAATTTGTTGCCGTCATGGGGCCTTCAGGATCTGGCAAAACCACTCTGCTCAATT
TGATTGGTGGTATCGATTCACCAGATGCCGGATCCGTTGTGGTGGACGGGCTTGATCTAGGCTCCGCATCCAAGAAGGAA
CTGGCGAAATTCCGTTCGCAGACCATCGGGTTTATTTTCCAGTTCTACAATCTGCTTCCCTTCCTGAATGCTGAAGACAA
CGTGGCGTTACCGTTGCAGCTGACAAGATTGAGTAGCAAAGAGAAGAGTGAGCGAGTAGCGCTGGCCCTAAACATTGTGG
GATTGAGTGAGAAGGCAAAGTTCAAACCGAGCCAGCTTTCTGGCGGGCAAGAACAACGTGTAGCGATCGCACGAAGCATC
GTGTCCGATCCGGCAATTTTGCTGTGCGATGAACCGACGGGCGACCTCGATCAGAAGACTGCAGATGAGATCATGGATTT
GCTCTCTGCGTTGAGCGAAAGCCACAACAAGACGATCGTGATGGTGACGCATGACCCACGTGTTGCCCAACGCGCGTCAC
GCATCATTCACTTTGACAAAGCTGATCGTTTCACACGCATCGCCGAACCAGCGTAG

Protein sequence : 
MTKTNIRIQNLSKHFEQGQVETHIFQDLDLSIKEGEFVAVMGPSGSGKTTLLNLIGGIDSPDAGSVVVDGLDLGSASKKE
LAKFRSQTIGFIFQFYNLLPFLNAEDNVALPLQLTRLSSKEKSERVALALNIVGLSEKAKFKPSQLSGGQEQRVAIARSI
VSDPAILLCDEPTGDLDQKTADEIMDLLSALSESHNKTIVMVTHDPRVAQRASRIIHFDKADRFTRIAEPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_005081853.1 lipoprotein-releasing system ATP-binding protein LolD NC_008702.1.4606598. Protein 4e-41 48
lolD YP_005081853.1 lipoprotein-releasing system ATP-binding protein LolD NC_012469.1.7686878. Protein 4e-42 47
lolD YP_005081853.1 lipoprotein-releasing system ATP-binding protein LolD CP001581.1.gene598.p Protein 2e-42 44
lolD YP_005081853.1 lipoprotein-releasing system ATP-binding protein LolD CP001581.1.gene798.p Protein 2e-38 43