Gene Information

Name : PSE_2592 (PSE_2592)
Accession : YP_005081122.1
Strain : Pseudovibrio sp. FO-BEG1
Genome accession: NC_016642
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2756491 - 2757807 bp
Length : 1317 bp
Strand : -
Note : -

DNA sequence :
ATGACCGCCCTTGCGCGCATTCAGGAACTTACCGCTCAGATTCCATCAAGTTCATGGAATATTGAGATAAGTGGGACCCT
CTGTGAGGTCACCCCTAATCACCTCAGAGTTAAAGGCCTTTCCGGCGGTGTCAACTTAGGAGATCAGGTCTCCTATATGA
GCAACAACGGTGAAGAATTTGGCGAAGTCATCCGAATTGAACCGGATAGCGTGCTCGTAAAGCCTTATGCGTCCAGATCA
GATCTTGGACTGGGCATCAAAGTCAAACGCTGCGGTGAACTCAGCTTCTACCCCGACAACAGCTGGAGAGGGCGCATCAT
CAATGCGTTTGGGCATCCTATCGATGGTCTGGGATCAATGGCTGAAGGACCTACGCTTGCGTCTTTCAACAATCTCCCCC
CTCCCCCGGTTCATAGAGCGCGTGTAAAAGACGCTGCACTGACTGGCGTGAGGGTCCTCGATCTCTTTACGCCAATTTGC
CATGGACAGCGCCTTGGTATCTTTGCAGGCTCTGGAGTCGGTAAATCTACGCTGCTTTCCATGATTGCCCGAAGCAACTC
CTTCGATACGGTTGTGATCGGCCTGATTGGTGAACGCGGTCGTGAAGTGCGTGAATTTGTCGAAGAGACCCTTGGGGATC
AACTCTCAAAGTCCGTCGTCGTTGTTGCCACGGGCGACGAGAGCCCGATGATGAGGCGCCTTGCTCCAAAGACTGCGATG
ACTGTTGCAGAACACTTCAGAGATCAAGGGCAGTCCGTTCTTCTTATTGTCGACAGCGTGACACGCTATGCGCATGCATT
GCGTGATGTGGCGCTTGCAGCAGGTGAACCGGCTCTTTCGCGAGGATACCCTCCAAGCGTCTTTTCCGAGCTCCCTCTCC
TCCTAGAACGCGCAGGACCTGGAATTGAAGGTAGCGGCATGATGACTGCGATCTTCTCCGTTCTCGTGGACGGCGATGAT
CACAACGATCCAGTTGCCGACAACATTCGTGGCCTGTTGGATGGTCACGTGGTTCTGGACAGGCATATTGCTGAGGAAGG
CCGCTATCCAGCTGTTAACGTACTTGGCTCCATTTCACGCCTTGCACAGAGTTGCTGGTCTCCTCAAGAGCGAGAACTTA
TCACGAAGCTCAAGGCTATGATCGCCAAGTTCGAGGATACAAAAGATTTACGCATGATGGGCGGCTATAAAGAGGGCGTA
GACCCGCTCTTAGATCAGGCTATTGAGATCGCCCCTAAAATCTATAGCGCGCTTGTGCAGGGCTTAGACGCACCCTCAAG
CCAGGATGCTTTCAACGAACTGGCACAATTACTATAA

Protein sequence :
MTALARIQELTAQIPSSSWNIEISGTLCEVTPNHLRVKGLSGGVNLGDQVSYMSNNGEEFGEVIRIEPDSVLVKPYASRS
DLGLGIKVKRCGELSFYPDNSWRGRIINAFGHPIDGLGSMAEGPTLASFNNLPPPPVHRARVKDAALTGVRVLDLFTPIC
HGQRLGIFAGSGVGKSTLLSMIARSNSFDTVVIGLIGERGREVREFVEETLGDQLSKSVVVVATGDESPMMRRLAPKTAM
TVAEHFRDQGQSVLLIVDSVTRYAHALRDVALAAGEPALSRGYPPSVFSELPLLLERAGPGIEGSGMMTAIFSVLVDGDD
HNDPVADNIRGLLDGHVVLDRHIAEEGRYPAVNVLGSISRLAQSCWSPQERELITKLKAMIAKFEDTKDLRMMGGYKEGV
DPLLDQAIEIAPKIYSALVQGLDAPSSQDAFNELAQLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escN AAC38383.1 EscN Virulence LEE Protein 9e-52 45
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-50 45
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-50 45
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 1e-49 44
escN YP_003223475.1 translocator EscN Virulence LEE Protein 1e-49 44
escN AAK26715.1 EscN Virulence LEE Protein 1e-49 44
escN AAL57542.1 EscN Virulence LEE Protein 1e-49 44
escN CAC81862.1 EscN protein Virulence LEE II Protein 8e-50 44
escN CAI43874.1 EscN protein Virulence LEE Protein 7e-50 44
escN NP_290268.1 hypothetical protein Virulence LEE Protein 4e-51 44
escN AAC31513.1 L0034 Virulence LEE Protein 3e-51 44
ECs4568 NP_312595.1 EscN Virulence LEE Protein 4e-51 44
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 3e-51 44
escN YP_003236088.1 translocator EscN Virulence LEE Protein 2e-51 43
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 3e-45 43
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 5e-45 43
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 9e-51 43
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 2e-56 42
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-56 42
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 2e-56 42
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-56 42
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 6e-57 42
unnamed AAL06369.1 EscN Virulence LEE Protein 3e-49 42
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 6e-54 42
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-54 42
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 6e-54 42
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-54 42
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-54 42
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 8e-54 42
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 6e-54 42
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 3e-53 41
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-53 41
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 5e-52 41
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 2e-42 41
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 2e-42 41
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 8e-43 41
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 8e-43 41
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 8e-43 41
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 8e-43 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSE_2592 YP_005081122.1 flagellar protein export ATPase FliI VFG2144 Protein 6e-57 46
PSE_2592 YP_005081122.1 flagellar protein export ATPase FliI VFG2331 Protein 5e-59 46
PSE_2592 YP_005081122.1 flagellar protein export ATPase FliI VFG0730 Protein 5e-52 45
PSE_2592 YP_005081122.1 flagellar protein export ATPase FliI VFG1254 Protein 3e-55 45
PSE_2592 YP_005081122.1 flagellar protein export ATPase FliI VFG0812 Protein 2e-51 44
PSE_2592 YP_005081122.1 flagellar protein export ATPase FliI VFG0515 Protein 1e-56 42
PSE_2592 YP_005081122.1 flagellar protein export ATPase FliI VFG0048 Protein 4e-58 41
PSE_2592 YP_005081122.1 flagellar protein export ATPase FliI VFG0555 Protein 3e-43 41
PSE_2592 YP_005081122.1 flagellar protein export ATPase FliI VFG1778 Protein 3e-45 41