Gene Information

Name : ssdH (PSE_2586)
Accession : YP_005081116.1
Strain : Pseudovibrio sp. FO-BEG1
Genome accession: NC_016642
Putative virulence/resistance : Unknown
Product : succinate-semialdehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2744075 - 2745550 bp
Length : 1476 bp
Strand : -
Note : -

DNA sequence :
ATGAGTTCAACACTCTCACTCACCAAAGAAATTCCGCTCCTTCGTGAAGCCTGTCTCATAGGGGGCAAATGGGTTAGCGG
AGATGAAAGCAACTCCATCTCAGTGAACAATCCAGCAACCGGTGAAATCATTGGCCGTGTGCCTCGATTTGGTCGCTCTG
AAACGGTTGAAGCCATCGATGCAGCACAGGCAGCATTTGCGGTCTGGTCTAAGATGACTGCGGTTGAGCGTTGCAATCTT
ATGCTGCGTTGGGCTGATGTGATTACTGAGAACCAGAAAGAACTTGCCGAACTGCTGACTATTGAGATGGGTAAGCCTCT
TGCAGAGGCGACAGGTGAAGTTGCTATCACGGCCAATTACATTCGTTTCTTCGCTGAGGAAGGCAAGCGCGTTTATGGTG
ATGTGATCCCTTCTCCATGGAAAGACCGCCGCATCATGGTGACCAAAGAGCCAGTAGGTGTTGTTGGTGCCATTACACCA
TGGAACTTCCCGAGCTCCATGTTGGGTCGCAAGTTGGCTGCGGCTCTTGGTTCCGGCTGTACGGTTGTTGCCAAGCCTGC
AAGCCAGACCCCTTATTCCGCTTTGATCCTTGGTGAGCTTGCTGAGAAGGCTGGCATCCCTGCTGGTGTCATCAACATCA
TCACAGGCTCTGCAGCTCAGATTGCAGATGAGCTTTGCGAGAACGAGAAGGTTCGCAAGATCACCTTCACCGGCTCCACT
CCAATTGGAAAGCAACTGGCTTCCAAAGCACTAGCAAACATGAAGAAAGTTTCCATGGAACTTGGCGGCAATGCGCCGTT
TATCGTGTTTGACTCCGCTGATCTGGATAAGGCTGTTGAGGGTGCGATTGCCTCTAAGTTCAGAAACTCTGGCCAGACCT
GCGTATGTGCCAACCGTATCTATGCTCAGGCGGGCATTTATGAAGAATTCTCTGCCAAGCTGAAGGCAGCGATTGAAGAT
CAGCTGCGTGTAGGTGATGGCTTGAAACCAGGTGTGAACCAGGGTCCTCTGATTGATGGTGGTGCAGTTGCCAAAGTTGA
AGAACTCATCGCAGATGCCGTTGAGAAAGGTGGAACCGTCATCACCGGCGGCAAGCTGGATGCACAGGGCGGGACTTTCT
TTGAACCGACTTTGCTGCTCAACGCGACACCTGACATGAAGGTTGCAAAAGAAGAGACATTCGGTCCGTTTGCACCTGTC
TTCAAGTTCGAGAGCGAAGAAGATGTCATCGCGATGGCCAATGACACTGAGTACGGCCTGGCTTGTTACTTCTACACACA
GGATCTGGGGCAGACTTTCCGCGTGATGGAAGCTCTTGAGTACGGTCTCGTGGGTGTAAACGAAGGCGTGATCACCACAG
AGTATGCGCCGTTTGGTGGTTACAAAGACAGCGGCATGGGCAATGAGGGTTCCAAATACGGAATCGATGACTACATCAAC
ATCAAATACTCTTGCATTGGTGGGCTTGGCCTTTAA

Protein sequence :
MSSTLSLTKEIPLLREACLIGGKWVSGDESNSISVNNPATGEIIGRVPRFGRSETVEAIDAAQAAFAVWSKMTAVERCNL
MLRWADVITENQKELAELLTIEMGKPLAEATGEVAITANYIRFFAEEGKRVYGDVIPSPWKDRRIMVTKEPVGVVGAITP
WNFPSSMLGRKLAAALGSGCTVVAKPASQTPYSALILGELAEKAGIPAGVINIITGSAAQIADELCENEKVRKITFTGST
PIGKQLASKALANMKKVSMELGGNAPFIVFDSADLDKAVEGAIASKFRNSGQTCVCANRIYAQAGIYEEFSAKLKAAIED
QLRVGDGLKPGVNQGPLIDGGAVAKVEELIADAVEKGGTVITGGKLDAQGGTFFEPTLLLNATPDMKVAKEETFGPFAPV
FKFESEEDVIAMANDTEYGLACYFYTQDLGQTFRVMEALEYGLVGVNEGVITTEYAPFGGYKDSGMGNEGSKYGIDDYIN
IKYSCIGGLGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 3e-128 55