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Name : clpV1 (PSE_1865) Accession : YP_005080397.1 Strain : Pseudovibrio sp. FO-BEG1 Genome accession: NC_016642 Putative virulence/resistance : Virulence Product : ATPase, type VI secretion system ClpV1 Function : - COG functional category : - COG ID : - EC number : - Position : 1970333 - 1973032 bp Length : 2700 bp Strand : + Note : COG0542 DNA sequence : ATGGCTCGACTGGAAATCAAGGCGCTGATTGAGCGTCTAAACCCGTGCTGTCGGCAGGCAATTGAAGAAGCTGCTAGCCT GTGCGTTTCAAACTCGCATCAGGAAGTAACAATTGAGCATTTCCTCATTTCTCTTGCTTCACAACCTGCAGTAGATTTTA GGCTTCTCGTACAAAGCCAGAATGTAGATGTCGACGTTTTGAACGAAGCATTTCGTGCGACGTTCAATCGGTATCGTCGG GTTGAAGCCGACCGGACACCAACCTTCTCGCCGCTGCTTCAGGATTTACTGCAGGATGCCTGGCTAATCGCTTCCGTCGA ACAAGGTGAAAAGACCGTTCGCTCAGGGGCAGTGCTGATTGCACTGCTGAATGATCGCGGTCGTTACATGCAGATGGATT ACTATCCGCTGCTTGAGCGCGTATCCTCCGACACTTTGCTCCGGCAGTTTGATGAGCTAACTGCGGGGTCATTTGAGAAG GACCATCGTGCCGGGCAGGGTGCTGCTGCAAGTGCAGGCGATACGGCGGATGGATTTCTTCATAAATACGGAACCAACTT CACTCAGCTTGCGAAGGATGGAAAGATTGACCCAATCTTCTGCCGGGACAATGAGATCCGCCAGATTATTGAGATCCTGT GTCGCCGTCGCAAAAATAATCCGATTTGTGTTGGCGAAGCAGGCGTAGGTAAAACCGCACTCGCTGAAGGGCTTGCACTG CGCATTGCAAATGGCGAGGTGCCTGAAGACTTTGCCAATGTCGCGCTATGGGGGCTGGATGTAGGTGCCCTGCAAGCGGG CGCTTCCATGAAAGGCGAGTTTGAAAAGCGCTTGAAGGGCGTGATCGATGAAGTGCGGTCCAGCGCTGAGCCGATCATTC TGTTCATCGATGAAGCCCATACTCTGATTGGGGCAGGGGGCGACCAAGGTGGTTCTGATGCCGCGAACCTTTTGAAACCA GCCCTTGCCAGAGGTGAGCTGAAAACAATCGCTGCAACAACCTGGACGGAGTACAAAAAGTACTTCGAAAAAGACCCTGC ACTCACTCGCCGCTTCCAGTTGGTGAAGCTGGATGAGCCGACCATTGATGAGGCTATCATCATCATGCGCGGGCTCAAAA AGGCCTATGAAGAAGCGCATGGCGTTTACATCACTGAAGAAGCTATTGGCGCTTCTGTTCGGCTGGCTGCGCGTTACATC ACCGGTCGCCAACTGCCGGACAAAGCGATTGATGTTTTGGATACAGCCTGTGCCCGTGTGCGCGCTGGAGCCAACACTCC CCCAGTAGAACTGCAGGATGTGGAGCAAAGCCTTCAAACCCTGAGCTGGGAGAGGGAAGGCCTGGAGCGCGATCAGCTCA CGGCACCTTTAGAGCCTGAGCAACTGGAGCGTCTGAAGGCAATTGCGGATCAGATCAATGATCTTGAAGAACGCAAGCAG GAACTATCATCTCGCCTTGAAGCGCAGGTGGCGCTGGCTGAAAACTTTATCTCTGCGCGTGAAGACTTGTTCCAAAAACA GCCGGAAACGCTGGAAGAAGATACACTGGAGCAAGGCCGCGCTCTGCTCGCCAATCACAAAAATGTGCTGATAGTGGAAG CCGGTTCTGAGCCTCTCATTTCAGTCGAAGTGGGCTCTGCGGAAATTGCTGCCATTATAAGCGATTGGACGGGCATTCCG GTCAACTCCATGGTTCAGGATGATTACCATCGCCTTCTGACACTTGCCGAAACCATGAAGAAGGCTATCAAAGGACAGGA CCACGCGATTGATGCCATCGAAGCGCGGTTGCGTGCATCACGGCTTGATCTGCATAAAAAAGGTCAGCCGTTGGGCGTGT TCTTCCTTGCTGGACCTTCAGGCGTCGGTAAAACAGAAACTGCTCTGGAAGTATCGCGCCGGTTGTTCGGTGGCGAGGAG TTCATCACGACCATCAATATGTCTGAGTATCAGGAGCGACATACAGTCTCTCGTCTGATTGGTTCGCCTCCCGGTTATGT CGGTTATGGCGAGGGTGGCGTTCTGACGGAAGCCATTCGCAAGAAGCCATACTCAGTCGTGCTGCTTGATGAAGTTGAAA AGGCTGACCCCAACGTCCTTAATTTGTTTTATCAGGCCTTTGACAAAGGAGAACTGGCAGACGGGGAAGGCCGCCTCATA GATTGTCGCAATGTGGTGTTCTTCCTGACCAGCAATCTGGGCTCAGATCAGATTGAGAACTGGGTTGCAAATGCAGAAGA CGATCAGGTGCCGAGCCACGGTTCAATGCTGAAGTCTCTTACTCCGCTGTTTGCTCAACATTTCAAACCAGCGCTTTTGG CCCGCATGGAACCTCTGGTGTACATGCCGCTTTCTGAAGAAGTGCTGGCCGACATTGTTCAGATGCGTCTGGATGATCTT ATTGAGCTGCTGAAAGAAACCCAAAAGATAGCTCTCACAATCACCGAGGCTGCATATGGCCGCGTGACGCAAATGTGCCG GGTGGCCTCAAACGGTGCGCGACTTGTTGATCAGGTTATCCAGCGCCAGTTGCTCCCCACTCTCTCCATTGAGATCCTGG AGGCGGGGCATCGCGGCGAGCACATCGCTTCCATCACCATCGACTCTCCAGAAGACGATGGCGGTTTCTCTTTTTCTGCG GTTTTCCAGGAAGATGCGATTGCTGAACCAACCGATGAAAACATATTGGAAGAGGCATAG Protein sequence : MARLEIKALIERLNPCCRQAIEEAASLCVSNSHQEVTIEHFLISLASQPAVDFRLLVQSQNVDVDVLNEAFRATFNRYRR VEADRTPTFSPLLQDLLQDAWLIASVEQGEKTVRSGAVLIALLNDRGRYMQMDYYPLLERVSSDTLLRQFDELTAGSFEK DHRAGQGAAASAGDTADGFLHKYGTNFTQLAKDGKIDPIFCRDNEIRQIIEILCRRRKNNPICVGEAGVGKTALAEGLAL RIANGEVPEDFANVALWGLDVGALQAGASMKGEFEKRLKGVIDEVRSSAEPIILFIDEAHTLIGAGGDQGGSDAANLLKP ALARGELKTIAATTWTEYKKYFEKDPALTRRFQLVKLDEPTIDEAIIIMRGLKKAYEEAHGVYITEEAIGASVRLAARYI TGRQLPDKAIDVLDTACARVRAGANTPPVELQDVEQSLQTLSWEREGLERDQLTAPLEPEQLERLKAIADQINDLEERKQ ELSSRLEAQVALAENFISAREDLFQKQPETLEEDTLEQGRALLANHKNVLIVEAGSEPLISVEVGSAEIAAIISDWTGIP VNSMVQDDYHRLLTLAETMKKAIKGQDHAIDAIEARLRASRLDLHKKGQPLGVFFLAGPSGVGKTETALEVSRRLFGGEE FITTINMSEYQERHTVSRLIGSPPGYVGYGEGGVLTEAIRKKPYSVVLLDEVEKADPNVLNLFYQAFDKGELADGEGRLI DCRNVVFFLTSNLGSDQIENWVANAEDDQVPSHGSMLKSLTPLFAQHFKPALLARMEPLVYMPLSEEVLADIVQMRLDDL IELLKETQKIALTITEAAYGRVTQMCRVASNGARLVDQVIQRQLLPTLSIEILEAGHRGEHIASITIDSPEDDGGFSFSA VFQEDAIAEPTDENILEEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 8e-162 | 46 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 6e-162 | 46 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 6e-119 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpV1 | YP_005080397.1 | ATPase, type VI secretion system ClpV1 | VFG2084 | Protein | 0.0 | 51 |
| clpV1 | YP_005080397.1 | ATPase, type VI secretion system ClpV1 | VFG2076 | Protein | 1e-138 | 41 |
