Gene Information

Name : PSE_1856 (PSE_1856)
Accession : YP_005080388.1
Strain : Pseudovibrio sp. FO-BEG1
Genome accession: NC_016642
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1960615 - 1961124 bp
Length : 510 bp
Strand : +
Note : COG3516

DNA sequence : 
ATGGCTGGCAAGGAAGGTTCTGTTGCGCCAAAAGAGCGAATTAATATTCGTTATGTTCCGGCAACTGGTGATCAGCAGGA
AGAAGTTGAACTGCCGCTGCGTCTAGTCATGCTGGGTGATTACAACGGCAAAGAAGATGACACGCCTCTTGAAGACCGCG
AGCTGCTTTCCGTCGATAAAAATACCTTTGCATCGGTTATGAAAGAAGCTGGTCTGGAGCGTGAGCTGACAGTTAAAAAT
ACCCTTGTTGAAGATGAGGATGCGCAGCTGGCCGTCAACTTGAAGTTTGAAGGCCTGAAGGACTTTGAGCCAGACTCCAT
TGTTAAACAAGTGCCTGAACTTAAAAAGCTAATTGATCTTCGTGAAGCGCTGGTTGCTTTGAAAGGGCCGCTTGGAAACA
TACCGGCATTCCGTAACCGGCTCGAGCAGATTTTGCAGGACAAAGAGCAAAGGGAAAAGCTTTTGTCAGAGCTGGATGCA
GTCGTGTCTTCTCAGGAAGAAACCAGCTGA

Protein sequence : 
MAGKEGSVAPKERINIRYVPATGDQQEEVELPLRLVMLGDYNGKEDDTPLEDRELLSVDKNTFASVMKEAGLERELTVKN
TLVEDEDAQLAVNLKFEGLKDFEPDSIVKQVPELKKLIDLREALVALKGPLGNIPAFRNRLEQILQDKEQREKLLSELDA
VVSSQEETS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 1e-38 53
aec17 YP_851427.1 hypothetical protein Not tested PAI II APEC-O1 Protein 5e-37 47
aec17 AAQ96711.1 Aec17 Not tested AGI-1 Protein 4e-37 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSE_1856 YP_005080388.1 hypothetical protein VFG2092 Protein 3e-50 63
PSE_1856 YP_005080388.1 hypothetical protein VFG2474 Protein 1e-37 52