Gene Information

Name : PSE_1676 (PSE_1676)
Accession : YP_005080210.1
Strain : Pseudovibrio sp. FO-BEG1
Genome accession: NC_016642
Putative virulence/resistance : Virulence
Product : manganese transport system ATP-binding protein MntB / zinc transport system ATP-binding protein TroB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1773855 - 1774679 bp
Length : 825 bp
Strand : +
Note : -

DNA sequence : 
ATGCACGACAGAAGTTCCTCCGGCCTGCACCTGTTACACGATACCGATGCAGGCAAAAACATAAGACCAGAAGATCTGCC
GTTCACCGTGCAGGGCATGACAGTTGCATACCATCACAAGCCAGTTCTTTGGGGCGTTTCCTACTCGGCTCCAAAAGGAT
GTCTCACAGCGATCATCGGTCCTAACGGGGCAGGCAAGTCCACATTCCTCAAAGCAGCGCTGGGCCTGATCCCGAAGCTT
TCTGGTGAAACCAAGGTGTTCGGTGAACCAATCGAAAAGGCCCTGAAGCGCATCGCTTATGTTCCGCAGCGCTCAGCCGT
GGATTGGGACTTCCCGGCGACAGCCATCGATGTGGTGATGATGGGCCTTTACGGCCAAATCGGCTGGTTCCGCTGGCCAT
CCCGCAAACATCGCCAAAAGGCAATGGACTGCCTGGAATCCGTTGGCATGCAGGACTTTGCAAACCGCCAGATCGGCCAG
CTTTCAGGCGGCCAGCAGCAGCGCGTGTTCCTTGCCCGTGCACTGGCGCAGGACTCTGAAGTCTATCTGATGGATGAGCC
GTTTGCGGGCGTGGATGCGGCAACAGAAAAAGCAATCGTTGCCGTGCTTCGTCAGCTTGTTGCAGACGGTAAAACCGTGC
TCGTCGTGCACCATGATCTTGAAACCGTACGCGACTACTACTCCCACATTCTGCTGCTCAATGGCCAGCATGTGGCGGAC
GGTCCGGTCGAAACAACCTTCACCCCGGAAAACTTGCAGAAAGCGTATGGCGGACGCCTTGCCAGCACCCAGCTGGATGG
CCTCTCAGAAGCCTCAGGCGCATAA

Protein sequence : 
MHDRSSSGLHLLHDTDAGKNIRPEDLPFTVQGMTVAYHHKPVLWGVSYSAPKGCLTAIIGPNGAGKSTFLKAALGLIPKL
SGETKVFGEPIEKALKRIAYVPQRSAVDWDFPATAIDVVMMGLYGQIGWFRWPSRKHRQKAMDCLESVGMQDFANRQIGQ
LSGGQQQRVFLARALAQDSEVYLMDEPFAGVDAATEKAIVAVLRQLVADGKTVLVVHHDLETVRDYYSHILLLNGQHVAD
GPVETTFTPENLQKAYGGRLASTQLDGLSEASGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 4e-47 46
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 3e-47 46
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 4e-54 45
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-54 45
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 3e-54 45
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 4e-53 44
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 4e-53 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSE_1676 YP_005080210.1 manganese transport system ATP-binding protein MntB / zinc transport system ATP-binding protein TroB BAC0400 Protein 1e-71 58
PSE_1676 YP_005080210.1 manganese transport system ATP-binding protein MntB / zinc transport system ATP-binding protein TroB BAC0350 Protein 2e-54 45
PSE_1676 YP_005080210.1 manganese transport system ATP-binding protein MntB / zinc transport system ATP-binding protein TroB BAC0440 Protein 3e-50 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSE_1676 YP_005080210.1 manganese transport system ATP-binding protein MntB / zinc transport system ATP-binding protein TroB VFG0526 Protein 2e-54 45