Gene Information

Name : HPL003_03140 (HPL003_03140)
Accession : YP_005073631.1
Strain : Paenibacillus terrae HPL-003
Genome accession: NC_016641
Putative virulence/resistance : Resistance
Product : peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 636453 - 637130 bp
Length : 678 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGGCTCTATTAAAAACCCAAGAGTTGAAAAAGTACTACGGCAACGGAGATACTGCTGTTCGCGCTCTAGACGGTGTGAA
CCTGGAGGTGGAAAGCGGAGAATTTGTAGCCATTATTGGTACATCCGGCAGCGGGAAGTCCACCCTTCTGCATATGCTCG
GTGGACTTGATCGTCCAACAAGCGGAAGCGTCACGATTGACGGTAAAGATATTTTTACACTGAAAGACGAAGAATTGACC
ATTTTTCGCAGACGAAAGATTGGCTTCGTATTTCAAAATTACAATCTGGTGCCAGTCTTGAATGTCTACGAAAATATTGT
GCTTCCTATTGAACTGGATGGTAAAGAACCGGACAAAACCCACATAGATAAAATTGTACATACCTTGGGCCTTGACCATA
AGCTGAATAATCTGCCCAACCATCTTTCGGGGGGCCAGCAGCAGCGTGTAGCCATTGCTAGAGCGCTAGCAGCCAAACCC
GCGATTGTCTTAGCAGATGAACCCACCGGAAACCTGGATAGCAAAACAAGCCTTGATGTGATGGGACTAATCAAAGTATC
CAGTCAGCAGTTCCGCCAAACGATGGTGATGATTACCCATAACGAGGAAATTGCGCAAATGGCAGATCGTATCATCCGTA
TTGAGGACGGTAAAATGGTCGGCGGTGAAGGCAAATGA

Protein sequence : 
MALLKTQELKKYYGNGDTAVRALDGVNLEVESGEFVAIIGTSGSGKSTLLHMLGGLDRPTSGSVTIDGKDIFTLKDEELT
IFRRRKIGFVFQNYNLVPVLNVYENIVLPIELDGKEPDKTHIDKIVHTLGLDHKLNNLPNHLSGGQQQRVAIARALAAKP
AIVLADEPTGNLDSKTSLDVMGLIKVSSQQFRQTMVMITHNEEIAQMADRIIRIEDGKMVGGEGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-33 48
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 47
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-34 47
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPL003_03140 YP_005073631.1 peptide ABC transporter ATPase CP001581.1.gene598.p Protein 2e-66 69
HPL003_03140 YP_005073631.1 peptide ABC transporter ATPase CP001581.1.gene798.p Protein 2e-52 57
HPL003_03140 YP_005073631.1 peptide ABC transporter ATPase NC_012469.1.7686878. Protein 6e-29 46
HPL003_03140 YP_005073631.1 peptide ABC transporter ATPase NC_012469.1.7685735. Protein 2e-29 45
HPL003_03140 YP_005073631.1 peptide ABC transporter ATPase NC_008702.1.4606598. Protein 2e-30 44