Gene Information

Name : HPL003_02720 (HPL003_02720)
Accession : YP_005073547.1
Strain : Paenibacillus terrae HPL-003
Genome accession: NC_016641
Putative virulence/resistance : Virulence
Product : iron compound ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 542208 - 543011 bp
Length : 804 bp
Strand : -
Note : COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

DNA sequence : 
ATGGACATTAAGGATATTACCTTTTCATATGACCGGAAAACGGATCGTCTTCACGCCATCAACGCTGTCATTGAGCCGGG
ACGGATTACAACCATCATTGGTCCCAACGGCTGCGGCAAATCGACGCTGCTTAGCGTCATGTCGAACAATGCGATTCCCC
GCTTGGGTCGGGTGATTCTGGACGGTAAAGAGATTGCCCGCTATAAGCCCAAGGAACTGGCCCGTCAACTGGCGGTGGTT
CATCAGCAGAACGAAGCCCCCTCTGACTTGACCGTAGAAAAGCTAGTCAGCTTCGGAAGGCTTCCTCATAAGAGCATGTT
CACAGCGAGACGTGAGGAGGACGAGCAGGCGGTCGAATGGGCGATAGCCTGTACGAATCTGGAGGAACGCAGAACACGTA
CACTGGACCAGTTATCCGGGGGAGAACGGCAACGTGTATGGATTGCAATGGCCTTGGCACAACGGACGCCGATTTTATTT
TTAGATGAGCCGACCACCTATCTGGATATGTACTACCAGCTTGAAATTTTGGAACTCATCCGGCAGTTAAATCAGGAACA
CGGCCTGACGATCGTAATGGTGCTACATGATATCAATCAGGCTATTCGTTATAGCGACGTTATGATTGCCATGAAGGAAG
GACGTATTATAACGAACGGTCCGCCAGCAGAGGTCGTCACATCCGAAATGATTCAGGAAGTCTATGGCGTGGAAGTAGTC
GTAAGACAGGACGATGAGGCGGGGATGTATCTCATTCCGATAGGTGTTGGAGCTTCCGTACATTTACAAGCACAGGGAGT
GTAG

Protein sequence : 
MDIKDITFSYDRKTDRLHAINAVIEPGRITTIIGPNGCGKSTLLSVMSNNAIPRLGRVILDGKEIARYKPKELARQLAVV
HQQNEAPSDLTVEKLVSFGRLPHKSMFTARREEDEQAVEWAIACTNLEERRTRTLDQLSGGERQRVWIAMALAQRTPILF
LDEPTTYLDMYYQLEILELIRQLNQEHGLTIVMVLHDINQAIRYSDVMIAMKEGRIITNGPPAEVVTSEMIQEVYGVEVV
VRQDDEAGMYLIPIGVGASVHLQAQGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-42 45
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-46 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 8e-45 43
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 8e-45 43
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-45 43
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-45 43
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-48 42
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-48 42
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-41 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPL003_02720 YP_005073547.1 iron compound ABC transporter ATP-binding protein BAC0164 Protein 2e-41 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPL003_02720 YP_005073547.1 iron compound ABC transporter ATP-binding protein VFG0925 Protein 3e-50 47
HPL003_02720 YP_005073547.1 iron compound ABC transporter ATP-binding protein VFG1042 Protein 1e-41 41