Gene Information

Name : HPL003_22815 (HPL003_22815)
Accession : YP_005077510.1
Strain : Paenibacillus terrae HPL-003
Genome accession: NC_016641
Putative virulence/resistance : Virulence
Product : alkaline phosphatase synthesis transcriptional regulatory protein phop
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4929373 - 4930083 bp
Length : 711 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence :
GTGAAAAAATCGGTACTGATCATTGATGACGAAGAGAAGATATCCAGATTACTCCAATTGGAATTATCTCACGAAGGATA
TACAGTTGAAATCGCTCAGACGGGCAAAGAAGGATTGGAAAAAGCTTTGGCACACACATGGGATATCATTATTTTGGATG
TGATGCTGCCTGAGCTTAACGGGGTCGAGGTGCTGAAGCAGATTCGAAAAGTGGACAATCATACACCCGTAATTATGGTC
ACTGCACGTAACACAACTATGGACAAGGTCTCCGGTCTGGATGAAGGTGCGAATGATTACATTACGAAGCCTTTTGAAAT
CGAGGAATTATTAGCGCGGATGCGGGCCAGCATGAGACATCAATTGGATACCAAAGCTACCTCTTCACAAGAAGAGGACA
AGCCGCCGTATCTTCAGGTTGATAACTTGGTGCTGGAACCCAAGACACGTTCTGTAGTGCGGGAAGGAAATCGAATCGAA
TTGACGCCCAAAGAATTTGATCTGCTTCACTACCTCATGGAGCACAAAAATCAAGTATTGCAGCGAGATCAAATGATTCA
GGATGTATGGGGGTTTGATTTTGTCGGTGATACGAATGTAGTCGATGTGTATATCCGATATGTTCGTAAAAAAATCGACC
ATGGTTACAAAAAAAAGCTGATTAAAACCGTGCGTGGCGTAGGGTATTGCATCAGGGAGGAAGACCATTGA

Protein sequence :
MKKSVLIIDDEEKISRLLQLELSHEGYTVEIAQTGKEGLEKALAHTWDIIILDVMLPELNGVEVLKQIRKVDNHTPVIMV
TARNTTMDKVSGLDEGANDYITKPFEIEELLARMRASMRHQLDTKATSSQEEDKPPYLQVDNLVLEPKTRSVVREGNRIE
LTPKEFDLLHYLMEHKNQVLQRDQMIQDVWGFDFVGDTNVVDVYIRYVRKKIDHGYKKKLIKTVRGVGYCIREEDH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-41 41
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-40 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop AE015929.1.gene1106. Protein 2e-47 48
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop NC_003923.1003417.p0 Protein 2e-50 48
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop NC_013450.8614146.p0 Protein 2e-50 48
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop NC_002951.3238224.p0 Protein 2e-50 48
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop NC_007793.3914065.p0 Protein 2e-50 48
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop NC_002758.1121390.p0 Protein 2e-50 48
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop NC_010079.5776364.p0 Protein 2e-50 48
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop NC_002952.2859858.p0 Protein 2e-50 48
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop NC_007622.3794948.p0 Protein 2e-50 48
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop HE999704.1.gene1528. Protein 2e-48 47
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop BAC0125 Protein 2e-42 44
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop FJ349556.1.orf0.gene Protein 8e-39 42
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop NC_002952.2859905.p0 Protein 8e-41 42
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop NC_007622.3794472.p0 Protein 7e-41 42
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop NC_002745.1124361.p0 Protein 6e-41 42
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop NC_009782.5559369.p0 Protein 6e-41 42
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop NC_002951.3237708.p0 Protein 6e-41 42
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop NC_003923.1003749.p0 Protein 5e-41 42
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop NC_002758.1121668.p0 Protein 6e-41 42
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop NC_009641.5332272.p0 Protein 6e-41 42
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop NC_013450.8614421.p0 Protein 6e-41 42
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop NC_007793.3914279.p0 Protein 6e-41 42
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop BAC0638 Protein 4e-37 42
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop BAC0308 Protein 4e-40 41
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop NC_012469.1.7685629. Protein 2e-41 41
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop BAC0347 Protein 7e-37 41
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop AE016830.1.gene1681. Protein 4e-44 41
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop BAC0197 Protein 3e-38 41
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop HE999704.1.gene2815. Protein 4e-42 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop VFG1390 Protein 5e-47 42
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop VFG1389 Protein 2e-40 42
HPL003_22815 YP_005077510.1 alkaline phosphatase synthesis transcriptional regulatory protein phop VFG0596 Protein 5e-42 41