Gene Information

Name : HPL003_22685 (HPL003_22685)
Accession : YP_005077484.1
Strain : Paenibacillus terrae HPL-003
Genome accession: NC_016641
Putative virulence/resistance : Virulence
Product : sensory transduction protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4902241 - 4902912 bp
Length : 672 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGAAGAAGATACTGCTGATCGAGGATGAAAAAAATTTGGCCCGTTTCATTGAGCTGGAACTAAAGCATGAATCTTACGA
GGTAACCGTTAAGTATGAAGGGCGGGAGGGGCTGGAGTCTGCATTAAGCGAGGAATGGGACATCATCCTGCTGGACTTAA
TGCTCCCAGGCATCAATGGAATTGAAGTGTGTCGACGGATTCGTAAAACGAAGCATACTCCGATCATTATGCTGACCGCC
AGAGACGGAGTGATGGACAAGGTGATGGGACTGGACAGTGGGGCAGATGATTATATCCCTAAGCCTTTTGCCATTGAAGA
GCTGCTCGCACGGATGCGTTCTTTGCTGCGACGCAGTGGCTCTGTGGAAGATACCAAACAAATTATCTACAATGGACTGG
TCCTAGATAGCGAGGCCCGCGTTTTGACCAAAGACCAGCAGATTATTGAATTGACGAAGCGTGAATTTGATCTGCTGTCC
ATATTAATGCAGAATATTGGGCGCGTCATGACCCGGGAGAGGCTAATGGAACTCATATGGGGCTATGATTCAGAGGTGGA
AACGAATGTCGTCGATGTGTATATTCGTTACCTGCGAAGCAAAATCGACGAGCCTGGGGAACCGAGCTTTATTCAGACAC
TACGCGGATTGGGGTATGTGATCCGAAAATGA

Protein sequence : 
MKKILLIEDEKNLARFIELELKHESYEVTVKYEGREGLESALSEEWDIILLDLMLPGINGIEVCRRIRKTKHTPIIMLTA
RDGVMDKVMGLDSGADDYIPKPFAIEELLARMRSLLRRSGSVEDTKQIIYNGLVLDSEARVLTKDQQIIELTKREFDLLS
ILMQNIGRVMTRERLMELIWGYDSEVETNVVDVYIRYLRSKIDEPGEPSFIQTLRGLGYVIRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 9e-33 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPL003_22685 YP_005077484.1 sensory transduction protein HE999704.1.gene1528. Protein 6e-66 65
HPL003_22685 YP_005077484.1 sensory transduction protein NC_003923.1003417.p0 Protein 4e-50 57
HPL003_22685 YP_005077484.1 sensory transduction protein NC_013450.8614146.p0 Protein 4e-50 57
HPL003_22685 YP_005077484.1 sensory transduction protein NC_002951.3238224.p0 Protein 4e-50 57
HPL003_22685 YP_005077484.1 sensory transduction protein NC_007793.3914065.p0 Protein 4e-50 57
HPL003_22685 YP_005077484.1 sensory transduction protein NC_002758.1121390.p0 Protein 4e-50 57
HPL003_22685 YP_005077484.1 sensory transduction protein NC_010079.5776364.p0 Protein 4e-50 57
HPL003_22685 YP_005077484.1 sensory transduction protein NC_002952.2859858.p0 Protein 4e-50 57
HPL003_22685 YP_005077484.1 sensory transduction protein NC_007622.3794948.p0 Protein 4e-50 57
HPL003_22685 YP_005077484.1 sensory transduction protein AE015929.1.gene1106. Protein 2e-45 55
HPL003_22685 YP_005077484.1 sensory transduction protein NC_012469.1.7685629. Protein 1e-38 43
HPL003_22685 YP_005077484.1 sensory transduction protein BAC0197 Protein 2e-29 43
HPL003_22685 YP_005077484.1 sensory transduction protein BAC0125 Protein 1e-31 42
HPL003_22685 YP_005077484.1 sensory transduction protein NC_005054.2598277.p0 Protein 3e-30 41
HPL003_22685 YP_005077484.1 sensory transduction protein NC_014475.1.orf0.gen Protein 3e-30 41
HPL003_22685 YP_005077484.1 sensory transduction protein AM180355.1.gene1830. Protein 5e-28 41
HPL003_22685 YP_005077484.1 sensory transduction protein NC_012469.1.7686381. Protein 2e-34 41
HPL003_22685 YP_005077484.1 sensory transduction protein BAC0308 Protein 2e-31 41
HPL003_22685 YP_005077484.1 sensory transduction protein DQ212986.1.gene4.p01 Protein 3e-27 41
HPL003_22685 YP_005077484.1 sensory transduction protein AE016830.1.gene1681. Protein 2e-34 41
HPL003_22685 YP_005077484.1 sensory transduction protein BAC0083 Protein 3e-30 41
HPL003_22685 YP_005077484.1 sensory transduction protein AE000516.2.gene3505. Protein 4e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPL003_22685 YP_005077484.1 sensory transduction protein VFG1390 Protein 7e-41 42