Gene Information

Name : HPL003_19815 (HPL003_19815)
Accession : YP_005076924.1
Strain : Paenibacillus terrae HPL-003
Genome accession: NC_016641
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4217482 - 4218201 bp
Length : 720 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGAGACATGTCATTCAAATTGAGGATATGAAAAAGGTGTACCAAGTCGGGGATCAGGAAATTCATGCCCTGCGTGATGT
GCAACTCAACATTGCTGACGGTGATTTTGTGGCAATCATGGGCCCGTCTGGATCAGGCAAGTCTACGATGATGAATGTTA
TCGGCTGTCTGGATCTGCCTACCTCGGGACAATTTTATTTGGACGGTTATTCGATACTGGATGCTCGTGAGGATGAGCTG
GCTATTATCCGTAATCAGAAAATCGGATTTGTATTTCAAAAATTTCATTTGCTTCCGCGGGCCACTGCTTTGGATAACGT
AGAGCTGCCAATGATTTATGCAGGCGTACCAGCCAAGGAGCGGCGCTTGCGGGCGATTGAGGCACTGACCAGTGTAGGGC
TGGGCGATCGGATGAACAACAAACCGAATGAGCTGTCAGGCGGTCAGCAGCAACGGGTATCCATTGCGCGCGCACTTGTG
AACAATCCGGTGATTCTCTTGGCGGATGAGCCGACAGGCGCATTGGACTCCAAAACGAGCGTTGAAATTATGGAGATTTT
CCAGCGCCTGAACGATCAGGGCAAAACGGTTGTGCTCGTTACGCATGATCAGGAAATTGCGGAATACGCCAAGCGTCTGA
TTCATTTTCGCGATGGACGGATTGAAGAGGATCAGCCTGTTGGGAACCGAAGAATGGCGGCAGAGGAAGTGAAGGCATGA

Protein sequence : 
MRHVIQIEDMKKVYQVGDQEIHALRDVQLNIADGDFVAIMGPSGSGKSTMMNVIGCLDLPTSGQFYLDGYSILDAREDEL
AIIRNQKIGFVFQKFHLLPRATALDNVELPMIYAGVPAKERRLRAIEALTSVGLGDRMNNKPNELSGGQQQRVSIARALV
NNPVILLADEPTGALDSKTSVEIMEIFQRLNDQGKTVVLVTHDQEIAEYAKRLIHFRDGRIEEDQPVGNRRMAAEEVKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-35 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPL003_19815 YP_005076924.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 9e-61 57
HPL003_19815 YP_005076924.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 7e-47 48
HPL003_19815 YP_005076924.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 1e-35 45
HPL003_19815 YP_005076924.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-37 41