Gene Information

Name : HPL003_19390 (HPL003_19390)
Accession : YP_005076841.1
Strain : Paenibacillus terrae HPL-003
Genome accession: NC_016641
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4124461 - 4125597 bp
Length : 1137 bp
Strand : +
Note : COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases

DNA sequence :
ATGAAACGTAAAACAAAGCTGATTCATGGCGGTCTCCCTACCGATCCGCATACTGGTGCGGTTAACGTTCCTATTTATCA
GGTAAGCACTTATGAGCAAGAGGAAATCGGCGTTCATAAAGGCTATGAATATTCGCGTACAGGCAATCCGACTCGCTTTG
CACTGGAAGAGCTGATCAAGGAGCTGGAGGAAGGAAAACGCGGTTTTGCTTTCGGCTCGGGGATGGCAGCGATTCATGCG
GTATTTTCACTGTTTCATGCTGGAGATCATATTTTGCTGACCGATGATGTATACGGAGGCACCTACCGTATTGTAAGCAA
GGTGCTTAACCGGATTGGCATTGAGGCTACGTTTGTAGATACGACTGACCTGGAGGCTGTCTCCAAAGCGATTCGTCCAA
ATACGAAGGCACTGTATGTAGAAACGCCTACGAACCCGCTGCTGAAGGTTACGGATATCCGTGCGGTTTCGGAGCTGGTG
AAAAAGCATGACCTATTGCTGATCGTGGACAATACATTTGCTACTCCATATTGGCAGACACCTATTACGCTTGGAGCCGA
TATCGTTATTCACTCCGCTACTAAATATTTGGGAGGCCACAGCGATGTTGTAGCTGGTCTGGCTGTTGTGAACAGCGATG
AGTTGGGTGAGCAGCTTCATTTTCTGCAAAACGCTATTGGCGGTATTCTCGGTCCGCAGGATTCCTGGTTGTTGATCCGC
GGGATCAAAACACTGGGTCTGCGTATGGAAGCCATTGAGCAAAATGCCAAGGAAATTGCGATCTTTTTGGAGAAGCATCC
GAAGGTTAGCAAAGTGTATTACCCTGGACTGGAAAGCCATGCGCAGCACGAGCTGTCCAAAATTCAGGCCGATGGCTTTG
GCGGCATTATTTCCTTTGATGTAGGTAGTGATGCCAACGCGGTTTCACTACTGAAAAAACTGAAATATTTTACGCTGGCT
GAGAGCCTGGGAGCGGTTGAAAGTCTGATTAGTGTTCCGGCGCGCATGACACATGCCTCCATTCCGGTAGAACGTCGCGC
AGAATTGGGTATTACCGAAGGACTGGTACGAATCTCCGTAGGGATTGAAGATCTGGAAGATTTAATTGAAGACTTACAGT
CTGCATTGCAAGGCTAA

Protein sequence :
MKRKTKLIHGGLPTDPHTGAVNVPIYQVSTYEQEEIGVHKGYEYSRTGNPTRFALEELIKELEEGKRGFAFGSGMAAIHA
VFSLFHAGDHILLTDDVYGGTYRIVSKVLNRIGIEATFVDTTDLEAVSKAIRPNTKALYVETPTNPLLKVTDIRAVSELV
KKHDLLLIVDNTFATPYWQTPITLGADIVIHSATKYLGGHSDVVAGLAVVNSDELGEQLHFLQNAIGGILGPQDSWLLIR
GIKTLGLRMEAIEQNAKEIAIFLEKHPKVSKVYYPGLESHAQHELSKIQADGFGGIISFDVGSDANAVSLLKKLKYFTLA
ESLGAVESLISVPARMTHASIPVERRAELGITEGLVRISVGIEDLEDLIEDLQSALQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-110 62
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-109 61
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 9e-76 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPL003_19390 YP_005076841.1 cystathionine gamma-synthase BAC0207 Protein 8e-64 42