Gene Information

Name : HPL003_18215 (HPL003_18215)
Accession : YP_005076608.1
Strain : Paenibacillus terrae HPL-003
Genome accession: NC_016641
Putative virulence/resistance : Virulence
Product : flagellar transport protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3876872 - 3877627 bp
Length : 756 bp
Strand : +
Note : COG1338 Flagellar biosynthesis pathway, component FliP

DNA sequence :
ATGAGAAAAAAGATTATACTTGCATGTTTGCTGCTTGTCTTGTTCAGCTTCATTTCGGTGACGGCGGCCTCTGCGGAACC
GATTCCGAACATTGATATTCAAGTCGGCAACTCGGATAAAGGACAGCCCGGTGCCACCTCGCTGTCTATTATTTTACTTA
TTACTGTCATCAGTGTAGCGCCCGCGTTGCTTGTGCTTATGACGAGCTTTACGCGAATTGTGATCGTGCTGGGCTTTGTT
CGCACCTCGCTGGGGACTCAGCAGATGCCGCCTAACCAGGTGCTTGTCGGGCTGGCTCTGTTTCTTACCTTATTCATTAT
GGCTCCGACGTTCTCGGCTATGAACGAAACTGCCCTTCAGCCGTATCTCAAGGGGGATTTGACACAGTCTCAGGCGCTGG
ACAAGGCTGCGGTACCAATCAAGACCTTTATGTTCTCTCATACACGGGAGAAGGACCTACTGCTCTTTATGAAATACACC
AAGATGGAAAAACCGAAAGACTATCAGGATATTCCATTAACGGTGATGGTTCCGGCTTATGCCATTAGTGAGTTAAAGAC
AGCATTTCAGATGGGCTTCATGATCTTTATACCGTTTTTGGTTATTGACATTGTGGTGGCGAGTACGCTCATGGCTATGG
GGATGATGATGCTGCCGCCGGTGATGATTTCGCTTCCTTTTAAAATACTGCTGTTTGTGCTCGTAGATGGTTGGTATCTG
GTCGTCAAATCATTGCTTCTGAGCTTTAACACATGA

Protein sequence :
MRKKIILACLLLVLFSFISVTAASAEPIPNIDIQVGNSDKGQPGATSLSIILLITVISVAPALLVLMTSFTRIVIVLGFV
RTSLGTQQMPPNQVLVGLALFLTLFIMAPTFSAMNETALQPYLKGDLTQSQALDKAAVPIKTFMFSHTREKDLLLFMKYT
KMEKPKDYQDIPLTVMVPAYAISELKTAFQMGFMIFIPFLVIDIVVASTLMAMGMMMLPPVMISLPFKILLFVLVDGWYL
VVKSLLLSFNT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 9e-23 43
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 9e-23 43
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 9e-23 43
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 3e-22 41
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 2e-27 41
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 2e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPL003_18215 YP_005076608.1 flagellar transport protein FliP VFG1259 Protein 8e-49 56
HPL003_18215 YP_005076608.1 flagellar transport protein FliP VFG2016 Protein 5e-44 56
HPL003_18215 YP_005076608.1 flagellar transport protein FliP VFG2494 Protein 2e-44 56
HPL003_18215 YP_005076608.1 flagellar transport protein FliP VFG2338 Protein 2e-41 55