Gene Information

Name : HPL003_18115 (HPL003_18115)
Accession : YP_005076588.1
Strain : Paenibacillus terrae HPL-003
Genome accession: NC_016641
Putative virulence/resistance : Unknown
Product : ATP-dependent protease ATP-binding subunit HslU
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3860206 - 3861606 bp
Length : 1401 bp
Strand : +
Note : COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit

DNA sequence :
ATGAATAATCAATCGTTGACGCCCAGACAAGTTGTATCCGAGCTGGATAAATATATTGTCGGACAGAAGCAGGCTAAAAA
ATCCGTTGCCGTTGCCTTGCGCAATCGTTATCGGCGCAGCAAGCTGCCGGATGATATCCGGGATGAAATTGTGCCCAAAA
ATATTCTGATGATCGGTCCGACGGGCGTGGGTAAAACCGAAATTGCACGCAGGCTGGCCCGACTCGTGGGAGCTCCTTTT
GTTAAGGTAGAGGCGACTAAGTTCACAGAAGTGGGTTATGTCGGCCGGGATGTGGAATCCATGGTGCGTGACTTGATGGA
AACCTCGATTCGCATCGTTAAAGCGGAGCGGACAGAGAATGTGAAGGACAAAGCCGAGGACATGGCGAATGAACGGATTG
TCAGTATTCTTGTACCTGCAGAGAAATCAAATAAATCCCAACGTAACCCTTTTGAAATGCTGTTTGGCAATAACACCGGG
AATTCGGTAGAGGAAGAACCCCCACAACAGGACACATCCTTGGCAGAGAAACGGCGTAAGGCTAAATTTGATCTATTGTC
AGGCAAGCTTGAGGATGAAGTTATTGAGATTGATGTGGAGGACACCGCACCCAATATGCTGGATATGTTTGCTGGGCAGG
GAAATGAGCAAATGGGCATGAATATGCAGGAAATGTTCGGAAGCTTTCTGCCAAAGCGGACCAAAAAGCGCAAGTTGCCG
GTGAAGGAAGCCCGTAAGGTGCTCATTCAGGATGAGGCTGCCAAGCTGATCGACATGGATGATGTCATTCAGGAGTCCGT
GAAGCGTGCTGAACAATCCGGTATCATTTTTATTGATGAAATCGACAAGATTGCCAGCCAGGGCAAGGGCAGTGGTCCTG
ATGTATCTAGAGAAGGTGTCCAGCGCGATATTTTGCCTATTGTCGAGGGTTCTACCATTATGACTAAATACGGCCCGGTA
AGGACAGATTATATTCTGTTTATCGCCGCTGGAGCTTTTCATGTTGCTAAGCCTTCTGATCTGATCCCTGAGCTGCAGGG
ACGTTTTCCAATCCGTGTTGAACTGAGCAGTCTCACATTGGATGAATTTGTATCCATTTTGACAGAGCCTAAAAATGCGC
TGACCAAGCAATACACGGATTTGCTTCGTACCGAAGAGATTGAAGTAGAATTTTCGGCGGAAGCCATCCGTGAAATTGCC
AGCATTGCCGAGTCTGTAAACCGGAATACGGAAAACATCGGTGCGCGCCGCTTGCATACCATTTTGGAGAAGTTGTTGGA
GGATTTGTCCTTCGAGGCTCCGGAGCTTACTTTGGACCGCATGATCATTACCCCGGAATATGTTCGGGAGAAGCTGGGTG
ATATTGCCCAAAACAGGGACCTTAGTCAGTATATTTTATGA

Protein sequence :
MNNQSLTPRQVVSELDKYIVGQKQAKKSVAVALRNRYRRSKLPDDIRDEIVPKNILMIGPTGVGKTEIARRLARLVGAPF
VKVEATKFTEVGYVGRDVESMVRDLMETSIRIVKAERTENVKDKAEDMANERIVSILVPAEKSNKSQRNPFEMLFGNNTG
NSVEEEPPQQDTSLAEKRRKAKFDLLSGKLEDEVIEIDVEDTAPNMLDMFAGQGNEQMGMNMQEMFGSFLPKRTKKRKLP
VKEARKVLIQDEAAKLIDMDDVIQESVKRAEQSGIIFIDEIDKIASQGKGSGPDVSREGVQRDILPIVEGSTIMTKYGPV
RTDYILFIAAGAFHVAKPSDLIPELQGRFPIRVELSSLTLDEFVSILTEPKNALTKQYTDLLRTEEIEVEFSAEAIREIA
SIAESVNRNTENIGARRLHTILEKLLEDLSFEAPELTLDRMIITPEYVREKLGDIAQNRDLSQYIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 6e-92 46