|
Name : HPL003_16285 (HPL003_16285) Accession : YP_005076226.1 Strain : Paenibacillus terrae HPL-003 Genome accession: NC_016641 Putative virulence/resistance : Unknown Product : DNA polymerase i Function : - COG functional category : - COG ID : - EC number : - Position : 3491817 - 3494471 bp Length : 2655 bp Strand : + Note : COG0258 5'-3' exonuclease (including N-terminal domain of PolI) DNA sequence : ATGGATAAACTCATGCTTATAGATGGCAACAGTATCATTTACCGGGCGTTTTTCGCTATGCCGCCGTTAACGAATTCGAG CGGACAGCAGACGAACGCGGTGTACGGATTTACAACGATGTTGCTGCGGCTTTTGGAGGAGCACAAGCCGACACATATAC TGGTTGCCTTTGATGCCGGAAAAATAACGTTCCGCCATAAAGGATACGAGGATTACAAGGGTGGACGGGAGAAAACGCCG CCGGAGCTGTCCCAACAATTCCCGCTGCTGAAAGAGCTGTTGACCGCCTTCGGCATTGCCCAGTTTGAGCTGGATGGCTA TGAGGCGGACGATATCATTGGAACCCTGTCTAAAACCGCGGACGAAGCTGGTTTTAACGTGCTGGTGGTTACCGGAGATA AGGATATGCTTCAGTTGGCTTCAGACAACGTCACTGTCGGCTTGACCCGCAAAGGGGTTACCGAGGTGGAGACGTACGGA CCTGAGCAGATTCAGGAGCGTTATGGCTTGAAGCCGCTGCAAATCATCGACCTCAAAGGTCTGATGGGCGATACGTCGGA TAACATTCCCGGGATTCCGGGTGTGGGGGAAAAAACAGCGCTCAAGCTACTGCATCAGTATGGATCGGTCGAAGAGGTGC TGGCGCATACGGATGAGCTGAAAGGAAAAATGAAAGAGCGCGTCGAAACGCATGCAGATGATGCACGGATGAGCAAGGAT TTGGCGACCATCTATCGGGATGTAACGCTGGACAAGCAGTTGGAAGATGTTGTCTTCGATGGGCTGCAAGCAGAAACGGG AGGACCTGCTCTGGCGAAGCTGGAGTTTAAGTCCTTGCTGGAGCGGTTATCCTTTTCGGGCGAGGTTGGCAGTGCAGGAA TAGGCGTAGAGGAAGCCGCGGCTGACGTGACCGTTCTGGACGAACAGCGGATTAGCGAGCTGGTAAATGTACTGGATACT GTCGATCTGCTACATGTGGAGACCCATGGCGATAATCCGCATCATGCTGAAATTGTGGGGCTGGTATTTGGCGCAGCGGG ACGACAGTTTTTTATGACCTTGGCTGTATTGCAAACTGATGCAGCCAAGCCTGTCCGTGAATGGCTCGCCGATGCTGGGT GCAAAAAACGGGGGCATGATCTGCACCGTACGGATTTAGCTTTGCATTGGCACGGGATCGAATTTGCCGGGGCCGAGTTC GATGTGCAGTTGGCCGGATATTTGCTGGACCCAACGGATGCGAACCAGTCACTGAGCGGATTGGCAGCCAAGTATGGCTT GTCTTCGATTCGTCCGGACGATGAAGTATTTGGCAAAGGCGCTAAATATAAAGTGCCTGATGTGGATGTGCTGTCCGATC ATGTGGCGCGCAAGGCAGCGGTGATTGAAGCGCTGGTGCCTGTACAGCAGGCTGAGCTGGAAAAAACGGAAATGCACAAG CTCTTCCATGAGCTGGAAATGCCGTTGTCCCGCATTTTGGCGGATATGGAGAAGCAGGGCATTTTGGTGAATGTGGAAGA ACTGCGCGCTTTGGGTAAAGAATTTGAAGCCCAGATTGAAACGCTGGTGCGCGAGATTTACATCATTGCCGGTGTGGAGT TCAATCTGAATTCGCCCAAGCAGCTAGGTGAAATTTTGTTCGATAAGCTGGGCCTTCCTGTTATCAAAAAGACGAAAACC GGGTACTCCACCGATGCCGAGGTACTGGAAAAGCTCGCCCCATACCATGATATCGTGCAAAACATTTTGCAGTATCGTAC TATTGCGAAACTCCAATCCACGTATGTAGAAGGATTACTTAAGGAAATTTCGGATAAAACGGGCAAGTTGCATACGTATT TCCGGCAGACAGTTGCAGCAACCGGACGATTGAGCAGTCAATTCCCAAATTTGCAAAATATTCCGATTCGTCTGGAAGAG GGACGTAAAATTCGTAAGGTATTTGTGCCGTCCGAGCCGGGTTGGTCCATTCTGGCGGCGGACTATTCGCAGATCGAGCT AAGGGTGCTGGCTGATATTTCGGATGATGAGCGATTGAAAGAAGCCTTTGTCCACGACATGGACATCCATACGAAGACGG CGTCCGATGTGTTTGGCATCCCTGCGGAAGACGTAGATTCTAACATGCGGCGTTCTGCCAAGGCGGTTAACTTCGGGATT GTCTACGGGATCAGTGATTACGGTTTGTCGCAAAACCTGAACATTACGCGCAAGGAAGCCGCTCGCTTTATTGACCAATA TTTTGATGTGTTCCAGGGCGTTCGTCGTTACATGGATGATATTGTGAAGGATGCGAAGCGGGACGGATACGTAAAAACGC TGCTGGAACGCAGACGTTATTTGCCGGAGATTAACGCCAGCAACTTCAACCTGCGTTCGTTCGCGGAGCGTACCGCAATG AATACGCCGATTCAGGGTACCGCAGCCGATATTATCAAGCTGGCGATGGTCCAGATGGATGCGGCGCTTCGCGACCGTAA TCTTCGCAGCCGTATGCTGCTTCAAGTACATGATGAGCTGGTTTTCGAGGTTCCGCCGGAGGAAATGGAAACGATGAAAG AGCTTGTCCCGGCTACGATGGAAGCGGCGTTGAAGCTGGCTGTACCGCTCAAAGCGGAAGTTAGCTATGGAAGTAATTGG TATGAAGCGAAATAA Protein sequence : MDKLMLIDGNSIIYRAFFAMPPLTNSSGQQTNAVYGFTTMLLRLLEEHKPTHILVAFDAGKITFRHKGYEDYKGGREKTP PELSQQFPLLKELLTAFGIAQFELDGYEADDIIGTLSKTADEAGFNVLVVTGDKDMLQLASDNVTVGLTRKGVTEVETYG PEQIQERYGLKPLQIIDLKGLMGDTSDNIPGIPGVGEKTALKLLHQYGSVEEVLAHTDELKGKMKERVETHADDARMSKD LATIYRDVTLDKQLEDVVFDGLQAETGGPALAKLEFKSLLERLSFSGEVGSAGIGVEEAAADVTVLDEQRISELVNVLDT VDLLHVETHGDNPHHAEIVGLVFGAAGRQFFMTLAVLQTDAAKPVREWLADAGCKKRGHDLHRTDLALHWHGIEFAGAEF DVQLAGYLLDPTDANQSLSGLAAKYGLSSIRPDDEVFGKGAKYKVPDVDVLSDHVARKAAVIEALVPVQQAELEKTEMHK LFHELEMPLSRILADMEKQGILVNVEELRALGKEFEAQIETLVREIYIIAGVEFNLNSPKQLGEILFDKLGLPVIKKTKT GYSTDAEVLEKLAPYHDIVQNILQYRTIAKLQSTYVEGLLKEISDKTGKLHTYFRQTVAATGRLSSQFPNLQNIPIRLEE GRKIRKVFVPSEPGWSILAADYSQIELRVLADISDDERLKEAFVHDMDIHTKTASDVFGIPAEDVDSNMRRSAKAVNFGI VYGISDYGLSQNLNITRKEAARFIDQYFDVFQGVRRYMDDIVKDAKRDGYVKTLLERRRYLPEINASNFNLRSFAERTAM NTPIQGTAADIIKLAMVQMDAALRDRNLRSRMLLQVHDELVFEVPPEEMETMKELVPATMEAALKLAVPLKAEVSYGSNW YEAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 0.0 | 49 |
