Gene Information

Name : HPL003_15735 (HPL003_15735)
Accession : YP_005076118.1
Strain : Paenibacillus terrae HPL-003
Genome accession: NC_016641
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3377319 - 3378743 bp
Length : 1425 bp
Strand : +
Note : COG0174 Glutamine synthetase

DNA sequence :
ATGTCCGTTGAAAATGTATTAAAAACAATTCAGGAAAATAATATTGAGTGGGTAGATTTTCGCTTTGTAGATTTGTCCGG
CCGTGCTCACCATATTTCGTTGCCAGCTTCCGAAGTAGATGAAGAAACATTTGTTAACGGTGTTGCTTTCGACGGTTCTT
CCATCCCCGGCTATCGTGGCATCGAGGAATCCGACATGGTTATGCTGCCCGATCCGGAAGCGGTTTTTATCGACCCTTTC
ACTCAGCATCCTACACTGAATATTCTGTGTGACATTGCTACGCCAGACGGCGAAAAATACGACCGCGATCCTCGCGGCAT
TGCAAGAAAAGCAGAAGAATTCCTGAAAACTGCTGGTGTAGGTACGAAAGTTAACTTTGCACCTGAATCCGAATTTTTCA
TTTTTGACGAAGTGCGCTACGGAAGCAGTATGAACAGCTCCTCCTTCTTCGTAGATTCCGAAGAAGCAGCTTGGAACACG
AATCGCAAGGAAGAGGGCGGCAATCTGGGCTTTAAAGTGGGAGTGAAGGGCGGATATGTGCCTGTAGCGCCAGTAGACAC
CCAACAAGACATCCGTAGTGAAATGTGCCGTTTGCTTGAAGAAGCAGGTCTGAGAATTGAGCGCCATCACCATGAGGTTG
CTACGGCAGGCCAGGCGGAAATTAACTTCCGTTTTGATACACTCAAGAAAACAGCTGATAATCTGCTTGTTTATAAATAC
ATTGTACACAACACAGCTCGTCAATACGGTAAAGTGGCAACATTTATGCCAAAACCACTCTTTGGAGACAACGGAAGCGG
TATGCACGTTCACCAATCCATTTTCGATGGAGATACTCCTTTGTTCTACGAAAAAGGTGCTTACGCTAACCTGAGCGAGC
TGGCCCTTCATTACATTGGCGGTATTCTGTACCATGCACCAGCGCTGATCGCTTTGACGAACCCAAGTACGAACTCGTTC
AAGCGTCTCGTTCCAGGCTATGAAGCTCCAGTTAACCTGGTATTCTCCAAAGGTAACCGTTCTGCAGCTGTTCGTATTCC
AGTAGCGGCTGTTACGCCTAAAGGCTGTCGGATCGAGTTCCGTACACCGGACTCCACAGCTAACCCTTACCTGGCCTTCT
CTGCAATGCTGATGGCGGGTCTGGATGGCATCAAGCGCAAACTGAACCCGATCGAATTGGGATATGGTCCACTTGATACG
AACATCTATGAGCTGTCTGAGGCTGAAATTGGTAAAATCCGCAGTGTTCCTGCTTCGCTGGATGAGGCTCTGGACGCTCT
GGAAGCCGACTACGAGTTCTTGACAGAAGGCGATGTATTTACGAAGGACTTTATTGATAACTATGTAGAACTTAAACGTT
CTGAAGCCAAATCGGTTAACATCCGTGTTCATCCGCACGAATACAGCCTGTATTTCGACTGCTAA

Protein sequence :
MSVENVLKTIQENNIEWVDFRFVDLSGRAHHISLPASEVDEETFVNGVAFDGSSIPGYRGIEESDMVMLPDPEAVFIDPF
TQHPTLNILCDIATPDGEKYDRDPRGIARKAEEFLKTAGVGTKVNFAPESEFFIFDEVRYGSSMNSSSFFVDSEEAAWNT
NRKEEGGNLGFKVGVKGGYVPVAPVDTQQDIRSEMCRLLEEAGLRIERHHHEVATAGQAEINFRFDTLKKTADNLLVYKY
IVHNTARQYGKVATFMPKPLFGDNGSGMHVHQSIFDGDTPLFYEKGAYANLSELALHYIGGILYHAPALIALTNPSTNSF
KRLVPGYEAPVNLVFSKGNRSAAVRIPVAAVTPKGCRIEFRTPDSTANPYLAFSAMLMAGLDGIKRKLNPIELGYGPLDT
NIYELSEAEIGKIRSVPASLDEALDALEADYEFLTEGDVFTKDFIDNYVELKRSEAKSVNIRVHPHEYSLYFDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 6e-84 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPL003_15735 YP_005076118.1 glutamine synthetase, type I VFG1399 Protein 3e-108 53